| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20709 | 5:23,222,711-23,225,843 | + | - | - | - | - | - | Detail |
| C1H5g25001 | 5:23,225,911-23,226,456 | - | C2H5g09227 | CX5g039631 | LOC_Os05g49320 | Os05g0568300 | - | Detail |
| C1H5g09281 | 5:23,233,124-23,233,834 | + | C2H5g10434 | CX5g038436 | LOC_Os05g49350 | Os05g0568600 | - | Detail |
| C1H5g06213 | 5:23,236,487-23,237,260 | + | C2H5g00779 | CX5g038804 | LOC_Os05g49370 | Os05g0568800 | - | Detail |
| C1H5g26494 | 5:23,240,841-23,244,369 | - | C2H5g19384 | CX5g039987 | LOC_Os05g49380 | Os05g0568900 | - | Detail |
| C1H5g12766 | 5:23,246,205-23,247,596 | + | C2H5g03690 | CX5g039827 | LOC_Os05g49400 | Os05g0569100 | - | Detail |
| C1H5g17667 | 5:23,248,245-23,249,195 | + | C2H5g19196 | CX5g037902 | LOC_Os05g49410 | Os05g0569200 | - | Detail |
| C1H5g15556 | 5:23,252,907-23,257,945 | + | C2H5g28987 | CX5g036828 | LOC_Os05g49420 | Os05g0569300 | - | Detail |
| C1H5g04196 | 5:23,261,749-23,264,231 | + | C2H5g03335 | CX5g040312 | LOC_Os05g49430 | Os05g0569400 | - | Detail |
| C1H5g30048 | 5:23,264,476-23,265,284 | + | C2H5g15224 | CX5g037007 | LOC_Os05g49440 | Os05g0569500 | - | Detail |
| C1H5g11632 | 5:23,272,502-23,287,961 | + | C2H5g01826 | CX5g037511 | LOC_Os05g49480 | Os05g0569900 | - | Detail |
| C1H5g05131 | 5:23,290,084-23,291,349 | + | C2H5g21108 | CX5g039576 | LOC_Os05g49490 | Os05g0570200 | - | Detail |
| C1H5g05622 | 5:23,304,444-23,306,729 | - | C2H5g18929 | CX5g039268 | LOC_Os05g49510 | Os05g0570350 | - | Detail |
| C1H5g08515 | 5:23,308,786-23,314,519 | + | C2H5g20762 | CX5g038483 | LOC_Os05g49520 | Os05g0570400 | - | Detail |
| C1H5g12265 | 5:23,315,924-23,317,114 | + | C2H5g25686 | CX5g039566 | LOC_Os05g49530 | - | - | Detail |
| C1H5g24631 | 5:23,323,406-23,324,034 | - | C2H5g07154 | CX5g038604 | LOC_Os05g49580 | Os05g0570900 | - | Detail |
| C1H5g07868 | 5:23,325,122-23,332,373 | - | C2H5g14338 | CX5g037010 | LOC_Os05g49590 | Os05g0571000 | - | Detail |
| C1H5g09249 | 5:23,338,954-23,340,486 | + | C2H5g15890 | CX5g038156 | LOC_Os05g49610 | Os05g0571100 | - | Detail |
| C1H5g06315 | 5:23,347,806-23,348,087 | + | C2H5g15353 | CX5g039972 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| C1H5g03473 | 5:23,348,148-23,348,327 | + | C2H5g30247 | CX5g039065 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g09394 | 5:17,248,766-17,254,030 | - | C1H5g20306 | CX5g037350 | LOC_Os05g34550 | Os05g0418100 | - | Detail |
| C2H5g30520 | 5:17,263,642-17,264,457 | - | C1H5g09296 | CX5g038596 | LOC_Os05g34570 | Os05g0418500 | - | Detail |
| C2H5g00424 | 5:17,272,098-17,274,428 | - | C1H5g19185 | CX5g037191 | LOC_Os05g34600 | Os05g0418800 | - | Detail |
| C2H5g04546 | 5:17,284,937-17,288,318 | - | C1H5g01087 | CX5g037281 | LOC_Os05g34630 | Os05g0419000 | - | Detail |
| C2H5g19079 | 5:17,291,019-17,295,583 | + | C1H5g10579 | CX5g038692 | LOC_Os05g34640 | Os05g0419100 | OsAL5 | Detail |
| C2H5g20412 | 5:17,297,332-17,301,485 | - | C1H5g24431 | CX5g040441 | LOC_Os05g34650 | Os05g0419200 | - | Detail |
| C2H5g19507 | 5:17,318,923-17,322,710 | - | C1H5g12812 | CX5g038818 | LOC_Os05g34670 | Os05g0419500 | - | Detail |
| C2H5g29392 | 5:17,332,143-17,333,443 | - | C1H5g20774 | CX5g040586 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| C2H5g16335 | 5:17,336,406-17,340,722 | + | C1H5g21437 | CX5g039248 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| C2H5g10847 | 5:17,347,553-17,350,226 | + | C1H5g23153 | CX5g039353 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| C2H5g17369 | 5:17,358,066-17,358,905 | - | C1H5g19351 | CX5g037413 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| C2H5g20050 | 5:17,372,686-17,378,899 | + | C1H5g00420 | CX5g040333 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| C2H5g06562 | 5:17,379,832-17,382,325 | + | C1H5g20696 | CX5g039680 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| C2H5g12654 | 5:17,387,621-17,393,916 | + | C1H1g14405 | CX5g038496 | LOC_Os05g34780 | Os05g0420800 | PMR | Detail |
| C2H5g20791 | 5:17,399,471-17,400,040 | + | C1H5g14092 | CX5g037173 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| C2H5g00178 | 5:17,403,992-17,409,514 | + | C1H5g19992 | CX5g038029 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| C2H5g17032 | 5:17,418,841-17,420,452 | + | C1H5g29371 | CX5g039797 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| C2H5g09186 | 5:17,434,321-17,440,621 | - | C1H5g12253 | CX5g038815 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| C2H5g24092 | 5:17,463,914-17,468,305 | - | C1H5g11306 | CX5g038799 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| C2H5g03824 | 5:17,471,206-17,478,606 | - | C1H5g25911 | CX5g038432 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |