| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g26074 | 5:23,086,357-23,092,010 | + | C2H5g18842 | CX5g037055 | LOC_Os05g49130 | Os05g0566300 | - | Detail |
| C1H5g01748 | 5:23,092,183-23,097,377 | - | C2H5g13359 | CX5g041068 | LOC_Os05g49140 | Os05g0566400 | OsMAPK20-5 | Detail |
| C1H5g28958 | 5:23,106,657-23,108,414 | - | C2H5g12336 | CX5g037085 | LOC_Os05g49150 | Os05g0566500 | - | Detail |
| C1H5g22715 | 5:23,110,098-23,113,336 | - | C2H5g15036 | CX5g039816 | LOC_Os05g49160 | Os05g0566600 | - | Detail |
| C1H5g26245 | 5:23,115,168-23,117,111 | - | C2H5g13087 | CX5g038155 | LOC_Os05g49170 | Os05g0566800 | Oscor413-tm1 | Detail |
| C1H5g19913 | 5:23,128,869-23,136,429 | + | C2H5g22084 | CX5g040745 | LOC_Os05g49180 | Os05g0566900 | - | Detail |
| C1H5g06369 | 5:23,141,521-23,147,112 | + | C2H5g01258 | CX5g039784 | LOC_Os05g49200 | Os05g0567100 | - | Detail |
| C1H5g12413 | 5:23,148,605-23,151,142 | + | C2H5g08767 | CX5g037082 | LOC_Os05g49210 | Os05g0567200 | - | Detail |
| C1H5g25066 | 5:23,152,121-23,154,822 | - | C2H5g14170 | CX5g038906 | LOC_Os05g49220 | Os05g0567300 | WSL6 | Detail |
| C1H5g11758 | 5:23,164,201-23,168,746 | + | C2H5g01392 | CX5g040336 | LOC_Os05g49230 | Os05g0567400 | - | Detail |
| C1H5g12293 | 5:23,172,833-23,173,090 | + | C2H5g03563 | CX5g041097 | LOC_Os05g49240 | Os05g0567600 | - | Detail |
| C1H5g15392 | 5:23,175,046-23,175,930 | - | C2H5g24128 | CX5g040334 | LOC_Os05g49250 | Os05g0567500 | - | Detail |
| C1H5g01573 | 5:23,177,771-23,178,893 | - | C2H7g04084 | CX5g038777 | - | - | - | Detail |
| C1H5g07754 | 5:23,182,586-23,184,896 | + | C2H5g00173 | CX5g040684 | LOC_Os05g49260 | Os05g0567700 | OsERD3 | Detail |
| C1H5g17662 | 5:23,185,018-23,186,510 | + | C2H5g00173 | CX5g040684 | LOC_Os05g49260 | Os05g0579000 | OsERD5 | Detail |
| C1H5g00633 | 5:23,188,205-23,192,688 | + | C2H5g11854 | CX5g040065 | LOC_Os05g49270 | Os05g0567800 | OsERD4 | Detail |
| C1H5g22150 | 5:23,195,183-23,196,075 | - | C2H5g22796 | CX5g036717 | LOC_Os05g49280 | Os05g0567900 | - | Detail |
| C1H5g27105 | 5:23,202,566-23,204,655 | - | C2H5g07754 | CX5g037874 | LOC_Os05g49290 | Os05g0568000 | - | Detail |
| C1H5g00985 | 5:23,214,229-23,217,342 | + | C2H5g05526 | CX5g038165 | LOC_Os05g49300 | Os05g0568100 | - | Detail |
| C1H5g09631 | 5:23,220,174-23,222,479 | + | C2H5g04009 | CX5g036842 | LOC_Os05g49310 | Os05g0568200 | Os2R_MYB61 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g20868 | 1:13,450,520-13,452,544 | - | - | - | - | Os01g0363950 | - | Detail |
| C2H1g23536 | 1:13,466,336-13,470,655 | + | C1H1g24145 | CX1g003575 | LOC_Os01g26174 | Os01g0364100 | - | Detail |
| C2H1g08431 | 1:13,500,059-13,502,591 | + | C1H1g15351 | CX1g003575 | LOC_Os01g26280 | Os01g0364800 | - | Detail |
| C2H1g01263 | 1:13,503,741-13,504,202 | - | - | CX1g006377 | - | - | - | Detail |
| C2H1g09218 | 1:13,511,084-13,513,790 | - | C1H1g00820 | CX1g000721 | LOC_Os01g26300 | Os01g0365000 | - | Detail |
| C2H1g10812 | 1:13,527,952-13,528,373 | - | C1H1g31120 | CX1g002129 | LOC_Os01g26310 | Os01g0365000 | - | Detail |
| C2H1g14612 | 1:13,547,883-13,550,252 | + | C1H1g24989 | CX1g000363 | LOC_Os01g26320 | Os01g0365300 | - | Detail |
| C2H1g19606 | 1:13,550,254-13,551,390 | + | C1H1g24989 | CX1g003444 | LOC_Os01g26320 | Os01g0365300 | - | Detail |
| C2H1g05597 | 1:13,561,516-13,563,405 | + | C1H1g13742 | CX1g002863 | LOC_Os01g26340 | Os01g0351500 | - | Detail |
| C2H1g01583 | 1:13,586,152-13,588,029 | + | - | - | - | Os10g0340100 | - | Detail |
| C2H1g08702 | 1:13,648,948-13,652,151 | + | C1H1g28775 | CX1g000084 | LOC_Os01g26390 | Os01g0366300 | Gnk2RLK-1 | Detail |
| C2H1g28276 | 1:13,653,448-13,655,490 | + | - | - | - | - | - | Detail |
| C2H1g18380 | 1:13,683,525-13,684,394 | - | C1H1g08262 | CX1g002303 | LOC_Os01g26920 | Os01g0367100 | - | Detail |
| C2H1g06533 | 1:13,687,142-13,688,920 | - | C1H1g25979 | CX1g004427 | LOC_Os01g26970 | Os01g0367100 | - | Detail |
| C2H1g18954 | 1:13,693,647-13,699,807 | - | C1H1g15445 | CX1g006237 | LOC_Os01g26940 | Os01g0367300 | - | Detail |
| C2H1g00335 | 1:13,704,344-13,708,942 | - | C1H1g15374 | CX1g002303 | LOC_Os01g26970 | Os01g0367400 | - | Detail |
| C2H1g03369 | 1:13,731,084-13,738,099 | + | C1H1g21458 | CX1g003934 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| C2H1g04184 | 1:13,745,523-13,752,855 | - | C1H1g24923 | CX1g006855 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| C2H1g05311 | 1:13,771,028-13,772,062 | + | C1H1g29900 | CX1g000728 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| C2H1g23898 | 1:13,791,146-13,803,780 | - | C1H1g21071 | CX1g002302 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |