| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g22105 | 5:22,546,236-22,549,674 | - | C2H5g27847 | CX5g039290 | LOC_Os05g48140 | Os05g0555000 | - | Detail |
| C1H5g16840 | 5:22,552,687-22,555,786 | + | C2H5g10183 | CX5g038247 | LOC_Os05g48150 | Os05g0555100 | B'κ-PP2A | Detail |
| C1H5g13710 | 5:22,556,723-22,557,820 | - | C2H5g11716 | - | LOC_Os05g48160 | Os05g0555300 | - | Detail |
| C1H5g11085 | 5:22,564,233-22,576,659 | + | C2H5g15943 | CX5g038070 | LOC_Os05g48200 | Os05g0555600 | OsNADH-GOGAT2 | Detail |
| C1H5g11125 | 5:22,578,440-22,578,880 | + | C2H5g14804 | CX5g038711 | LOC_Os05g48210 | Os05g0555700 | - | Detail |
| C1H5g17174 | 5:22,581,048-22,581,583 | + | C2H5g21976 | CX5g040703 | LOC_Os05g48220 | Os05g0555800 | - | Detail |
| C1H5g14156 | 5:22,583,921-22,587,981 | + | C2H5g17429 | CX5g038929 | LOC_Os05g48230 | Os05g0556000 | - | Detail |
| C1H5g06260 | 5:22,588,622-22,594,192 | - | C2H5g01888 | CX5g037340 | LOC_Os05g48240 | Os05g0556100 | - | Detail |
| C1H5g12215 | 5:22,599,265-22,603,339 | + | C2H5g01099 | CX5g040868 | LOC_Os05g48260 | Os05g0556300 | WSD1, ditl1 | Detail |
| C1H5g22881 | 5:22,610,762-22,613,359 | + | C2H5g04051 | CX5g041078 | LOC_Os05g48270 | Os05g0556400 | - | Detail |
| C1H5g26581 | 5:22,619,133-22,623,734 | + | C2H5g09153 | CX5g038890 | LOC_Os05g48280 | Os05g0556600 | - | Detail |
| C1H5g09943 | 5:22,627,022-22,631,515 | + | C2H5g25254 | CX5g038413 | LOC_Os05g48290 | Os05g0556700 | - | Detail |
| C1H5g19314 | 5:22,633,344-22,634,501 | - | C2H5g14032 | CX5g038685 | LOC_Os05g48300 | Os05g0556800 | OsPUP7 | Detail |
| C1H5g22527 | 5:22,640,435-22,641,204 | - | C2H5g11375 | - | - | - | - | Detail |
| C1H5g22120 | 5:22,641,906-22,642,451 | + | C2H5g21976 | CX5g040703 | LOC_Os05g48220 | Os05g0556900 | - | Detail |
| C1H5g03876 | 5:22,646,600-22,648,657 | + | C2H5g04318 | CX5g037582 | LOC_Os05g48320 | Os05g0557000 | - | Detail |
| C1H5g30394 | 5:22,649,162-22,652,629 | - | C2H5g27989 | CX5g039564 | LOC_Os05g48330 | Os05g0557100 | - | Detail |
| C1H5g07029 | 5:22,659,634-22,664,798 | + | C2H5g12748 | CX5g039452 | LOC_Os05g48340 | Os05g0557200 | - | Detail |
| C1H5g15077 | 5:22,667,187-22,670,551 | - | C2H5g05831 | CX5g040314 | LOC_Os05g48360 | Os05g0557400 | - | Detail |
| C1H5g30428 | 5:22,672,403-22,675,105 | - | C2H5g12137 | CX5g038427 | LOC_Os05g48370 | Os05g0557500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g09691 | 4:26,580,711-26,584,445 | + | C1H4g14177 | CX4g033376 | LOC_Os04g52130 | Os04g0610800 | RLIN1, LLM1 | Detail |
| C2H4g11372 | 4:26,592,973-26,598,234 | + | C1H4g09163 | CX4g036098 | LOC_Os04g52140 | Os04g0610900 | - | Detail |
| C2H4g01714 | 4:26,599,431-26,599,788 | - | C1H4g23425 | - | - | - | - | Detail |
| C2H4g26244 | 4:26,608,374-26,611,850 | + | C1H4g04249 | CX4g036457 | LOC_Os04g52164 | Os04g0611200 | OsCER2, CER2 | Detail |
| C2H4g08391 | 4:26,612,604-26,614,002 | + | C1H4g10872 | CX4g036475 | LOC_Os04g52180 | Os04g0611300 | - | Detail |
| C2H4g02094 | 4:26,615,862-26,619,562 | + | C1H4g27242 | CX4g034440 | LOC_Os04g52190 | Os04g0611400 | OsVSR7 | Detail |
| C2H4g06949 | 4:26,619,463-26,625,917 | - | C1H4g09397 | CX4g034242 | LOC_Os04g52200 | Os04g0611500 | - | Detail |
| C2H4g00671 | 4:26,630,076-26,634,745 | + | C1H4g09771 | CX4g033691 | LOC_Os04g52230 | Os04g0611800 | OsKSL2 | Detail |
| C2H4g15117 | 4:26,655,250-26,661,059 | + | C1H4g22925 | CX4g032176 | LOC_Os04g52240 | Os04g0612000 | KS2, OsKS2, KS2, KSL2, OsKSL2, OsTPS27, OsKSL5 | Detail |
| C2H4g26250 | 4:26,662,537-26,663,765 | - | C1H4g18596 | CX4g035138 | LOC_Os04g58555 | Os04g0612100 | - | Detail |
| C2H4g02839 | 4:26,674,749-26,675,429 | + | C1H4g22025 | CX4g036089 | LOC_Os04g35020 | Os04g0429500 | OsCSLH2 | Detail |
| C2H4g23617 | 4:26,677,520-26,677,987 | + | C1H4g29756 | CX4g031769 | LOC_Os04g52260 | Os04g0612500 | OsHyPRP16 | Detail |
| C2H4g26765 | 4:26,679,506-26,684,605 | - | C1H4g23379 | CX4g032492 | LOC_Os04g52270 | Os04g0612600 | - | Detail |
| C2H4g08408 | 4:26,686,364-26,689,958 | + | C1H4g22616 | CX4g036512 | LOC_Os04g52280 | Os04g0612700 | FC1, OsCAD7 | Detail |
| C2H4g11392 | 4:26,690,347-26,692,701 | - | C1H4g13487 | CX4g033473 | LOC_Os04g52290 | Os04g0612800 | - | Detail |
| C2H4g06866 | 4:26,693,576-26,693,998 | + | C1H4g23018 | CX4g035500 | LOC_Os04g52300 | Os04g0612900 | - | Detail |
| C2H4g30388 | 4:26,694,560-26,696,779 | - | C1H4g19703 | CX4g036361 | LOC_Os04g52310 | Os04g0613000 | ZIP3, OsZIP3 | Detail |
| C2H4g14538 | 4:26,704,186-26,707,913 | + | C1H4g25868 | CX4g032554 | LOC_Os04g52320 | Os04g0613200 | - | Detail |
| C2H4g16426 | 4:26,709,781-26,712,495 | - | C1H4g13224 | CX4g033530 | LOC_Os04g52330 | Os04g0613300 | - | Detail |
| C2H4g12813 | 4:26,713,796-26,718,593 | - | C1H4g01801 | CX4g033988 | LOC_Os04g52340 | Os04g0613400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |