| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g28488 | 5:22,136,350-22,146,917 | - | C2H5g01084 | CX5g039251 | LOC_Os05g46740 | Os05g0545300 | - | Detail |
| C1H5g07171 | 5:22,152,545-22,154,277 | - | C2H5g27152 | CX5g040715 | LOC_Os05g46760 | Os05g0545400 | - | Detail |
| C1H5g28842 | 5:22,157,059-22,171,041 | + | C2H5g06020 | CX5g040995 | LOC_Os05g46780 | Os05g0545600 | - | Detail |
| C1H5g11625 | 5:22,173,645-22,174,205 | + | C2H5g12310 | CX5g038306 | LOC_Os05g46790 | Os05g0546400 | - | Detail |
| C1H5g08653 | 5:22,175,838-22,177,288 | + | C2H5g18437 | CX5g039852 | LOC_Os05g46800 | Os05g0545900 | - | Detail |
| C1H5g30534 | 5:22,177,326-22,177,677 | + | C2H5g18437 | CX5g039852 | LOC_Os05g46890 | Os05g0545900 | - | Detail |
| C1H5g01044 | 5:22,188,306-22,188,986 | + | C2H5g16888 | CX5g040967 | LOC_Os05g46830 | Os05g0546300 | - | Detail |
| C1H5g21422 | 5:22,194,114-22,194,746 | + | C2H5g26619 | CX5g038306 | LOC_Os05g46840 | Os05g0546400 | - | Detail |
| C1H5g08788 | 5:22,196,864-22,198,612 | - | C2H5g22705 | CX5g037119 | LOC_Os05g47446 | Os05g0547850 | OsPDCD5 | Detail |
| C1H5g20241 | 5:22,204,244-22,204,879 | + | C2H5g02769 | CX5g036931 | LOC_Os05g47470 | Os05g0548100 | - | Detail |
| C1H5g30022 | 5:22,207,393-22,208,343 | - | C2H5g11129 | CX5g038940 | LOC_Os05g47480 | Os05g0548200 | - | Detail |
| C1H5g19984 | 5:22,210,213-22,216,240 | + | C2H5g21680 | CX5g039873 | LOC_Os05g47490 | Os05g0548300 | - | Detail |
| C1H5g17282 | 5:22,218,100-22,223,756 | + | C2H5g06103 | CX5g036974 | LOC_Os05g47500 | Os05g0548500 | - | Detail |
| C1H5g02698 | 5:22,224,670-22,225,950 | + | - | - | - | - | - | Detail |
| C1H5g08583 | 5:22,231,518-22,232,846 | + | C2H5g19664 | CX5g038468 | LOC_Os05g47510 | Os05g0548600 | qGSN5 | Detail |
| C1H5g05315 | 5:22,240,957-22,243,218 | - | C2H5g21416 | CX5g040999 | LOC_Os05g47530 | Os05g0548800 | - | Detail |
| C1H5g25644 | 5:22,244,036-22,248,321 | - | C2H5g15278 | CX5g037857 | LOC_Os05g47540 | Os05g0548900 | - | Detail |
| C1H5g10839 | 5:22,251,719-22,258,621 | - | C2H5g01022 | CX5g036928 | LOC_Os05g47550 | Os05g0549000 | - | Detail |
| C1H5g10095 | 5:22,260,903-22,264,888 | - | C2H5g00365 | CX5g040729 | LOC_Os05g47560 | Os05g0549100 | - | Detail |
| C1H5g05047 | 5:22,277,384-22,278,397 | + | C2H5g12244 | CX1g003738 | LOC_Os05g47580 | Os05g0549300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24523 | 4:20,368,391-20,369,323 | - | C1H4g31685 | CX4g035066 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| C2H4g28567 | 4:20,369,334-20,371,687 | - | C1H4g31685 | CX4g035066 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| C2H4g26351 | 4:20,375,278-20,376,191 | - | - | - | - | Os04g0471700 | - | Detail |
| C2H4g00702 | 4:20,384,174-20,385,460 | - | C1H4g16030 | CX4g033693 | LOC_Os04g39590 | Os04g0472100 | - | Detail |
| C2H4g03647 | 4:20,385,815-20,386,597 | - | C1H4g16030 | CX4g032102 | LOC_Os04g39600 | Os04g0472200 | - | Detail |
| C2H4g19420 | 4:20,393,577-20,398,039 | + | C1H4g00073 | CX4g034292 | LOC_Os04g39610 | Os04g0472300 | - | Detail |
| C2H4g22876 | 4:20,403,160-20,410,476 | + | C1H4g27433 | CX4g035839 | LOC_Os04g39629 | Os04g0472400 | - | Detail |
| C2H4g21465 | 4:20,413,737-20,416,103 | + | C1H4g18621 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C2H4g05936 | 4:20,417,104-20,417,445 | + | C1H4g18621 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C2H4g04802 | 4:20,418,030-20,419,619 | - | C1H4g12075 | CX4g036049 | LOC_Os04g39660 | - | - | Detail |
| C2H4g02841 | 4:20,419,839-20,422,233 | + | C1H4g21886 | CX4g035542 | LOC_Os04g39670 | Os04g0472700 | - | Detail |
| C2H4g28146 | 4:20,424,851-20,427,436 | + | - | CX4g033721 | LOC_Os04g39680 | Os04g0472900 | - | Detail |
| C2H4g20727 | 4:20,427,911-20,430,021 | - | C1H4g18594 | CX4g031996 | LOC_Os04g39700 | Os04g0473400 | RPL6 | Detail |
| C2H4g02603 | 4:20,431,637-20,432,138 | - | C1H4g22390 | CX4g036319 | LOC_Os04g39770 | Os04g0473800 | FCP1, FCP1/OsCLE402, Os CLE402, OsCLE402 | Detail |
| C2H4g23069 | 4:20,438,019-20,447,937 | - | C1H4g00302 | CX4g034400 | LOC_Os04g39780 | Os04g0473900 | DWA1 | Detail |
| C2H4g27268 | 4:20,465,053-20,466,506 | - | C1H4g22436 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C2H4g08296 | 4:20,468,818-20,469,627 | - | C1H4g30851 | - | LOC_Os04g39840 | Os04g0474300 | - | Detail |
| C2H4g06810 | 4:20,472,789-20,478,079 | - | C1H4g08294 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C2H4g06498 | 4:20,479,799-20,485,888 | - | C1H4g25243 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C2H4g26901 | 4:20,489,101-20,494,194 | - | C1H4g24332 | - | LOC_Os04g39880 | Os04g0474800 | OsTAGG2, Os4BGlu12 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |