| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g28488 | 5:22,136,350-22,146,917 | - | C2H5g01084 | CX5g039251 | LOC_Os05g46740 | Os05g0545300 | - | Detail |
| C1H5g07171 | 5:22,152,545-22,154,277 | - | C2H5g27152 | CX5g040715 | LOC_Os05g46760 | Os05g0545400 | - | Detail |
| C1H5g28842 | 5:22,157,059-22,171,041 | + | C2H5g06020 | CX5g040995 | LOC_Os05g46780 | Os05g0545600 | - | Detail |
| C1H5g11625 | 5:22,173,645-22,174,205 | + | C2H5g12310 | CX5g038306 | LOC_Os05g46790 | Os05g0546400 | - | Detail |
| C1H5g08653 | 5:22,175,838-22,177,288 | + | C2H5g18437 | CX5g039852 | LOC_Os05g46800 | Os05g0545900 | - | Detail |
| C1H5g30534 | 5:22,177,326-22,177,677 | + | C2H5g18437 | CX5g039852 | LOC_Os05g46890 | Os05g0545900 | - | Detail |
| C1H5g01044 | 5:22,188,306-22,188,986 | + | C2H5g16888 | CX5g040967 | LOC_Os05g46830 | Os05g0546300 | - | Detail |
| C1H5g21422 | 5:22,194,114-22,194,746 | + | C2H5g26619 | CX5g038306 | LOC_Os05g46840 | Os05g0546400 | - | Detail |
| C1H5g08788 | 5:22,196,864-22,198,612 | - | C2H5g22705 | CX5g037119 | LOC_Os05g47446 | Os05g0547850 | OsPDCD5 | Detail |
| C1H5g20241 | 5:22,204,244-22,204,879 | + | C2H5g02769 | CX5g036931 | LOC_Os05g47470 | Os05g0548100 | - | Detail |
| C1H5g30022 | 5:22,207,393-22,208,343 | - | C2H5g11129 | CX5g038940 | LOC_Os05g47480 | Os05g0548200 | - | Detail |
| C1H5g19984 | 5:22,210,213-22,216,240 | + | C2H5g21680 | CX5g039873 | LOC_Os05g47490 | Os05g0548300 | - | Detail |
| C1H5g17282 | 5:22,218,100-22,223,756 | + | C2H5g06103 | CX5g036974 | LOC_Os05g47500 | Os05g0548500 | - | Detail |
| C1H5g02698 | 5:22,224,670-22,225,950 | + | - | - | - | - | - | Detail |
| C1H5g08583 | 5:22,231,518-22,232,846 | + | C2H5g19664 | CX5g038468 | LOC_Os05g47510 | Os05g0548600 | qGSN5 | Detail |
| C1H5g05315 | 5:22,240,957-22,243,218 | - | C2H5g21416 | CX5g040999 | LOC_Os05g47530 | Os05g0548800 | - | Detail |
| C1H5g25644 | 5:22,244,036-22,248,321 | - | C2H5g15278 | CX5g037857 | LOC_Os05g47540 | Os05g0548900 | - | Detail |
| C1H5g10839 | 5:22,251,719-22,258,621 | - | C2H5g01022 | CX5g036928 | LOC_Os05g47550 | Os05g0549000 | - | Detail |
| C1H5g10095 | 5:22,260,903-22,264,888 | - | C2H5g00365 | CX5g040729 | LOC_Os05g47560 | Os05g0549100 | - | Detail |
| C1H5g05047 | 5:22,277,384-22,278,397 | + | C2H5g12244 | CX1g003738 | LOC_Os05g47580 | Os05g0549300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g28900 | 6:5,697,135-5,698,193 | + | C1H6g15439 | CX6g044911 | LOC_Os06g12360 | Os06g0228950 | - | Detail |
| C2H6g05024 | 6:5,698,908-5,701,872 | - | C1H6g14481 | CX6g043477 | LOC_Os06g12370 | Os06g0229000 | - | Detail |
| C2H6g02329 | 6:5,710,871-5,716,601 | + | C1H6g30867 | CX6g043791 | LOC_Os06g12390 | Os06g0229200 | GalT | Detail |
| C2H6g13941 | 6:5,719,681-5,727,442 | + | C1H6g06761 | CX6g041469 | LOC_Os06g12400 | Os06g0229300 | - | Detail |
| C2H6g19443 | 6:5,728,867-5,730,473 | + | C1H6g31791 | CX6g045028 | LOC_Os06g12410 | Os06g0257600 | - | Detail |
| C2H6g15100 | 6:5,731,963-5,736,797 | + | C1H6g30269 | CX6g044435 | LOC_Os06g12450 | Os06g0229800 | ALK, alk, SSII-3, OsSSIIa, OsSSII-3, SSIIa, SSS2A, OsSSIIaChr6 | Detail |
| C2H6g02967 | 6:5,741,601-5,746,594 | + | C1H6g02539 | CX6g041722 | LOC_Os06g12460 | Os06g0230100 | OsCSLA3 | Detail |
| C2H6g18393 | 6:5,755,045-5,755,854 | + | C1H6g20958 | CX6g043899 | LOC_Os06g12500 | Os06g0231050 | CASP3, OsCASP3 | Detail |
| C2H6g07579 | 6:5,756,527-5,758,080 | - | C1H6g22566 | CX6g042564 | LOC_Os06g12510 | Os06g0231100 | - | Detail |
| C2H6g25430 | 6:5,760,221-5,762,376 | + | C1H6g10940 | CX6g042953 | LOC_Os06g12530 | Os06g0231300 | ROX3 | Detail |
| C2H6g00549 | 6:5,762,707-5,764,524 | - | C1H6g22566 | CX6g044108 | LOC_Os06g03570 | Os06g0231400 | - | Detail |
| C2H6g20507 | 6:5,770,817-5,773,183 | - | C1H6g09372 | CX6g042127 | LOC_Os06g12560 | Os06g0231600 | - | Detail |
| C2H6g04942 | 6:5,776,967-5,780,407 | - | C1H6g21654 | CX6g045497 | LOC_Os06g12580 | Os06g0232000 | - | Detail |
| C2H6g06021 | 6:5,784,696-5,794,631 | - | C1H6g16903 | CX6g044039 | LOC_Os06g12590 | Os06g0232100 | - | Detail |
| C2H6g20456 | 6:5,804,890-5,810,664 | + | C1H6g16972 | CX6g043544 | LOC_Os06g12600 | Os06g0232200 | OsFRK3 | Detail |
| C2H6g11066 | 6:5,828,992-5,832,397 | + | C1H6g17211 | CX6g041379 | LOC_Os06g12610 | Os06g0232300 | OsPIN1a | Detail |
| C2H6g00896 | 6:5,829,312-5,830,534 | - | - | - | - | Os06g0232350 | - | Detail |
| C2H6g26342 | 6:5,837,559-5,838,065 | - | C1H6g01622 | CX6g043622 | LOC_Os06g12620 | Os06g0232400 | - | Detail |
| C2H6g04539 | 6:5,851,234-5,854,132 | - | C1H6g13976 | CX6g045802 | LOC_Os06g12630 | Os06g0232600 | - | Detail |
| C2H6g12736 | 6:5,855,278-5,858,915 | + | C1H6g19729 | - | LOC_Os06g12640 | Os06g0232700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |