| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g24903 | 5:21,907,575-21,910,433 | - | C2H5g27574 | CX5g040683 | LOC_Os05g46230 | Os05g0539700 | - | Detail |
| C1H5g09340 | 5:21,914,229-21,915,488 | - | C2H5g03274 | CX5g040385 | LOC_Os05g46240 | Os05g0539800 | - | Detail |
| C1H5g27591 | 5:21,919,595-21,921,994 | + | C2H5g20087 | CX5g040129 | LOC_Os05g46250 | Os05g0539900 | - | Detail |
| C1H5g14200 | 5:21,923,505-21,927,434 | + | C2H5g21500 | CX5g039216 | LOC_Os05g46260 | Os05g0540000 | OsFSE6, OsGINT1 | Detail |
| C1H5g12849 | 5:21,927,471-21,927,986 | - | C2H5g13866 | CX5g040191 | LOC_Os05g46310 | Os05g0540600 | - | Detail |
| C1H5g13283 | 5:21,928,389-21,929,544 | - | C2H5g13866 | CX5g040191 | LOC_Os05g46390 | Os05g0536800 | - | Detail |
| C1H5g10025 | 5:21,930,456-21,934,221 | - | C2H5g29925 | - | LOC_Os05g46270 | Os05g0540100 | - | Detail |
| C1H5g28338 | 5:21,934,621-21,935,485 | + | C2H5g01666 | - | LOC_Os05g46280 | Os05g0540200 | - | Detail |
| C1H5g11949 | 5:21,935,844-21,940,484 | - | C2H5g04565 | - | LOC_Os05g46290 | Os05g0540300 | - | Detail |
| C1H5g25265 | 5:21,948,078-21,948,578 | - | C2H5g24441 | CX5g040191 | LOC_Os05g46320 | Os05g0540600 | - | Detail |
| C1H5g01480 | 5:21,950,444-21,957,717 | + | C2H5g25396 | CX5g041012 | LOC_Os05g46330 | Os05g0540800 | - | Detail |
| C1H5g24700 | 5:21,959,061-21,960,191 | - | C2H5g16790 | CX5g036866 | LOC_Os05g46340 | Os05g0540900 | - | Detail |
| C1H5g20535 | 5:21,964,168-21,966,856 | + | C2H5g11235 | CX5g037419 | LOC_Os05g46350 | Os05g0541100 | - | Detail |
| C1H5g03970 | 5:21,969,724-21,971,590 | + | C2H5g11661 | CX5g037625 | LOC_Os05g46360 | Os05g0541200 | - | Detail |
| C1H5g12775 | 5:21,982,318-21,983,532 | + | C2H5g14117 | CX5g036893 | LOC_Os05g46370 | Os05g0541400 | OsLF | Detail |
| C1H5g21489 | 5:21,988,145-21,989,752 | + | C2H5g27978 | CX5g040191 | LOC_Os05g46380 | Os05g0540600 | - | Detail |
| C1H5g06562 | 5:21,998,464-22,003,666 | + | C2H5g13798 | CX5g039412 | LOC_Os05g46395 | Os05g0541700 | - | Detail |
| C1H5g30366 | 5:22,005,510-22,005,701 | - | C2H5g16362 | CX5g039337 | - | Os05g0541750 | - | Detail |
| C1H5g29960 | 5:22,007,655-22,008,529 | + | C2H5g26824 | CX5g040694 | LOC_Os05g43240 | Os05g0541800 | - | Detail |
| C1H5g10948 | 5:22,009,102-22,010,634 | - | C2H5g22825 | CX5g039692 | LOC_Os05g46430 | Os05g0541900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03514 | 4:29,448,149-29,448,868 | - | C1H4g29276 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| C2H4g20638 | 4:29,453,004-29,455,947 | - | C1H4g19147 | CX4g033675 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| C2H4g07967 | 4:29,465,585-29,468,272 | - | C1H4g19147 | CX4g033675 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| C2H4g26737 | 4:29,471,984-29,473,277 | + | C1H4g27331 | CX4g035023 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| C2H4g18780 | 4:29,474,576-29,478,577 | + | C1H4g25251 | CX4g032489 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| C2H4g23930 | 4:29,479,590-29,481,940 | - | C1H4g10442 | CX4g035437 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| C2H4g04165 | 4:29,483,130-29,486,877 | + | C1H4g01418 | CX4g031421 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| C2H4g19726 | 4:29,493,719-29,493,928 | - | - | CX4g032599 | LOC_Os04g57280 | - | - | Detail |
| C2H4g12154 | 4:29,496,010-29,497,272 | + | C1H4g14062 | CX4g035483 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| C2H4g10729 | 4:29,500,106-29,501,983 | - | - | CX4g031851 | LOC_Os04g57300 | Os04g0668700 | - | Detail |
| C2H4g24314 | 4:29,504,815-29,508,179 | + | C1H4g07320 | CX4g033794 | LOC_Os04g57310 | Os04g0668800 | - | Detail |
| C2H4g10649 | 4:29,508,269-29,511,441 | - | C1H4g11017 | CX4g035618 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| C2H4g23402 | 4:29,513,570-29,515,132 | - | C1H4g09478 | CX4g035266 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| C2H4g26783 | 4:29,517,880-29,518,455 | - | C1H4g01273 | CX4g032933 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| C2H4g26457 | 4:29,521,567-29,524,942 | + | C1H4g10679 | CX4g033726 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| C2H4g10159 | 4:29,525,812-29,526,486 | + | - | CX4g032922 | LOC_Os04g57360 | Os04g0669475 | - | Detail |
| C2H4g05368 | 4:29,531,719-29,534,324 | - | C1H4g10307 | CX4g034719 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| C2H4g28278 | 4:29,534,703-29,536,222 | - | C1H4g20800 | CX4g032862 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| C2H4g09192 | 4:29,536,981-29,540,198 | - | C1H4g20558 | CX4g032503 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| C2H4g18679 | 4:29,542,726-29,545,857 | - | C1H4g00350 | CX4g034572 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |