| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17442 | 5:21,747,623-21,748,074 | - | C2H5g08199 | CX5g036985 | LOC_Os05g45900 | - | - | Detail |
| C1H5g09902 | 5:21,751,522-21,753,414 | - | C2H5g03964 | CX5g040827 | LOC_Os05g45910 | Os05g0535700 | - | Detail |
| C1H5g26794 | 5:21,754,857-21,759,273 | + | C2H5g23148 | CX5g039841 | LOC_Os05g45920 | Os05g0535800 | - | Detail |
| C1H5g04706 | 5:21,763,971-21,768,419 | + | C2H5g09271 | CX5g040307 | LOC_Os05g45930 | Os05g0535900 | - | Detail |
| C1H5g13586 | 5:21,769,915-21,773,173 | + | C2H5g00994 | CX5g041010 | LOC_Os05g45950 | Os05g0536200 | OsVDAC2 | Detail |
| C1H5g21249 | 5:21,773,557-21,775,413 | - | C2H5g24554 | CX5g040905 | LOC_Os05g45954 | Os05g0536250 | OsWRI3 | Detail |
| C1H5g05098 | 5:21,776,761-21,783,084 | - | C2H5g22798 | CX5g039751 | - | Os05g0536400 | - | Detail |
| C1H5g17794 | 5:21,792,085-21,796,247 | + | C2H5g21268 | CX5g040734 | LOC_Os05g45980 | Os05g0552900 | OsMAP65-3.2 | Detail |
| C1H5g04244 | 5:21,798,663-21,799,196 | + | - | CX5g039351 | - | - | - | Detail |
| C1H5g22851 | 5:21,800,908-21,802,566 | - | C2H5g21034 | CX5g038645 | LOC_Os05g45990 | Os05g0536800 | - | Detail |
| C1H5g14506 | 5:21,806,575-21,808,306 | + | C2H5g02348 | CX5g041126 | LOC_Os05g46000 | Os05g0536900 | - | Detail |
| C1H5g15585 | 5:21,821,357-21,822,374 | + | C2H5g09611 | CX5g037099 | LOC_Os05g46020 | Os05g0537100 | OsWRKY7 | Detail |
| C1H5g21573 | 5:21,826,746-21,843,698 | + | C2H5g26816 | CX5g038037 | LOC_Os05g46030 | Os05g0537200 | - | Detail |
| C1H5g14803 | 5:21,844,121-21,846,998 | - | C2H5g28952 | CX5g037558 | LOC_Os05g46040 | Os05g0537400 | OsPP2C50 | Detail |
| C1H5g29039 | 5:21,854,858-21,856,081 | + | C2H5g05280 | CX5g040403 | LOC_Os05g46050 | Os05g0537700 | - | Detail |
| C1H5g12314 | 5:21,874,694-21,875,980 | + | C2H5g23455 | CX5g040403 | LOC_Os05g46170 | Os05g0539150 | - | Detail |
| C1H5g22837 | 5:21,890,094-21,891,359 | + | C2H5g20343 | CX5g040403 | LOC_Os05g46190 | Os05g0539300 | - | Detail |
| C1H5g08208 | 5:21,892,339-21,899,475 | - | C2H5g03604 | CX5g039402 | LOC_Os05g46200 | Os05g0539400 | OsBGAL9 | Detail |
| C1H5g30453 | 5:21,899,673-21,903,398 | + | C2H5g03462 | CX5g037335 | LOC_Os05g46210 | Os05g0539500 | - | Detail |
| C1H5g05923 | 5:21,903,976-21,906,735 | + | C2H5g14490 | CX5g038955 | LOC_Os05g46220 | Os05g0539600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g25229 | 4:15,794,678-15,801,442 | + | C1H4g16826 | CX4g032461 | LOC_Os04g31330 | Os04g0382200 | EXO70F3, OsEXO70F3, OsExo70F3, OrysaF3_Exo70, OsExo70-F3, Exo70-F3 | Detail |
| C2H4g08291 | 4:15,804,992-15,811,254 | - | C1H4g08250 | CX4g033731 | LOC_Os04g31340 | Os04g0382300 | - | Detail |
| C2H4g21907 | 4:15,824,605-15,830,076 | + | C1H4g23640 | CX4g033213 | LOC_Os04g31390 | Os04g0382700 | - | Detail |
| C2H4g11523 | 4:15,836,091-15,839,486 | + | C1H4g29507 | CX4g031504 | LOC_Os04g31400 | Os04g0382800 | - | Detail |
| C2H4g17370 | 4:15,913,333-15,914,224 | + | - | - | - | - | - | Detail |
| C2H4g25485 | 4:15,931,863-15,933,250 | - | C1H4g27689 | CX4g031500 | LOC_Os04g31610 | Os04g0385600 | - | Detail |
| C2H4g09951 | 4:15,993,743-15,994,288 | + | C1H4g28157 | CX4g036232 | LOC_Os04g31670 | Os04g0386300 | - | Detail |
| C2H4g19704 | 4:16,003,534-16,005,941 | + | C1H4g01776 | CX4g034133 | LOC_Os04g31690 | Os04g0386500 | - | Detail |
| C2H4g09573 | 4:16,006,671-16,011,720 | - | C1H4g26815 | CX4g031487 | LOC_Os04g31700 | Os04g0386600 | - | Detail |
| C2H4g14766 | 4:16,012,438-16,013,706 | + | C1H4g21589 | CX4g036353 | LOC_Os04g31710 | Os04g0386700 | - | Detail |
| C2H4g24192 | 4:16,016,241-16,016,962 | - | C1H4g05500 | CX4g032722 | LOC_Os04g31730 | Os04g0386900 | - | Detail |
| C2H4g21209 | 4:16,039,785-16,039,997 | + | C1H4g13044 | CX4g034278 | LOC_Os04g31804 | Os04g0387300 | - | Detail |
| C2H4g17117 | 4:16,052,858-16,056,057 | + | C1H4g13813 | CX4g031777 | LOC_Os04g31790 | Os04g0387300 | - | Detail |
| C2H4g01397 | 4:16,061,878-16,080,060 | + | C1H4g20734 | CX4g031777 | LOC_Os04g31804 | Os04g0387300 | - | Detail |
| C2H4g11321 | 4:16,090,868-16,092,505 | + | C1H4g27855 | CX4g036291 | LOC_Os04g31880 | Os04g0388000 | - | Detail |
| C2H4g19348 | 4:16,122,233-16,129,901 | + | C1H4g11099 | CX4g033923 | LOC_Os04g31900 | Os04g0388500 | - | Detail |
| C2H4g18326 | 4:16,130,559-16,133,214 | - | C1H4g07543 | CX4g035641 | LOC_Os04g31910 | Os04g0388601 | - | Detail |
| C2H4g10433 | 4:16,140,780-16,145,134 | + | C1H4g09954 | CX4g031743 | LOC_Os04g31924 | Os04g0388700 | - | Detail |
| C2H4g06056 | 4:16,147,299-16,150,489 | + | C1H4g09321 | CX4g034542 | LOC_Os04g31940 | Os04g0388800 | - | Detail |
| C2H4g16596 | 4:16,152,682-16,155,851 | - | C1H4g17922 | CX4g034481 | LOC_Os04g31950 | Os04g0388900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |