| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17442 | 5:21,747,623-21,748,074 | - | C2H5g08199 | CX5g036985 | LOC_Os05g45900 | - | - | Detail |
| C1H5g09902 | 5:21,751,522-21,753,414 | - | C2H5g03964 | CX5g040827 | LOC_Os05g45910 | Os05g0535700 | - | Detail |
| C1H5g26794 | 5:21,754,857-21,759,273 | + | C2H5g23148 | CX5g039841 | LOC_Os05g45920 | Os05g0535800 | - | Detail |
| C1H5g04706 | 5:21,763,971-21,768,419 | + | C2H5g09271 | CX5g040307 | LOC_Os05g45930 | Os05g0535900 | - | Detail |
| C1H5g13586 | 5:21,769,915-21,773,173 | + | C2H5g00994 | CX5g041010 | LOC_Os05g45950 | Os05g0536200 | OsVDAC2 | Detail |
| C1H5g21249 | 5:21,773,557-21,775,413 | - | C2H5g24554 | CX5g040905 | LOC_Os05g45954 | Os05g0536250 | OsWRI3 | Detail |
| C1H5g05098 | 5:21,776,761-21,783,084 | - | C2H5g22798 | CX5g039751 | - | Os05g0536400 | - | Detail |
| C1H5g17794 | 5:21,792,085-21,796,247 | + | C2H5g21268 | CX5g040734 | LOC_Os05g45980 | Os05g0552900 | OsMAP65-3.2 | Detail |
| C1H5g04244 | 5:21,798,663-21,799,196 | + | - | CX5g039351 | - | - | - | Detail |
| C1H5g22851 | 5:21,800,908-21,802,566 | - | C2H5g21034 | CX5g038645 | LOC_Os05g45990 | Os05g0536800 | - | Detail |
| C1H5g14506 | 5:21,806,575-21,808,306 | + | C2H5g02348 | CX5g041126 | LOC_Os05g46000 | Os05g0536900 | - | Detail |
| C1H5g15585 | 5:21,821,357-21,822,374 | + | C2H5g09611 | CX5g037099 | LOC_Os05g46020 | Os05g0537100 | OsWRKY7 | Detail |
| C1H5g21573 | 5:21,826,746-21,843,698 | + | C2H5g26816 | CX5g038037 | LOC_Os05g46030 | Os05g0537200 | - | Detail |
| C1H5g14803 | 5:21,844,121-21,846,998 | - | C2H5g28952 | CX5g037558 | LOC_Os05g46040 | Os05g0537400 | OsPP2C50 | Detail |
| C1H5g29039 | 5:21,854,858-21,856,081 | + | C2H5g05280 | CX5g040403 | LOC_Os05g46050 | Os05g0537700 | - | Detail |
| C1H5g12314 | 5:21,874,694-21,875,980 | + | C2H5g23455 | CX5g040403 | LOC_Os05g46170 | Os05g0539150 | - | Detail |
| C1H5g22837 | 5:21,890,094-21,891,359 | + | C2H5g20343 | CX5g040403 | LOC_Os05g46190 | Os05g0539300 | - | Detail |
| C1H5g08208 | 5:21,892,339-21,899,475 | - | C2H5g03604 | CX5g039402 | LOC_Os05g46200 | Os05g0539400 | OsBGAL9 | Detail |
| C1H5g30453 | 5:21,899,673-21,903,398 | + | C2H5g03462 | CX5g037335 | LOC_Os05g46210 | Os05g0539500 | - | Detail |
| C1H5g05923 | 5:21,903,976-21,906,735 | + | C2H5g14490 | CX5g038955 | LOC_Os05g46220 | Os05g0539600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g13211 | 8:21,447,034-21,448,143 | - | C1H8g31232 | CX8g054182 | LOC_Os08g39980 | Os08g0510700 | - | Detail |
| C2H8g07448 | 8:21,448,505-21,449,838 | - | C1H8g31232 | CX8g054182 | LOC_Os08g39980 | Os08g0510700 | - | Detail |
| C2H8g25749 | 8:21,452,577-21,453,716 | - | C1H9g12273 | CX8g050917 | LOC_Os08g39990 | Os08g0510800 | - | Detail |
| C2H8g04181 | 8:21,458,968-21,461,660 | + | C1H8g04920 | CX8g052027 | LOC_Os08g40010 | Os08g0510900 | - | Detail |
| C2H8g25618 | 8:21,462,672-21,464,210 | + | C1H8g29844 | CX8g051467 | LOC_Os08g40020 | Os08g0511000 | - | Detail |
| C2H8g09758 | 8:21,469,305-21,471,218 | - | C1H8g08233 | CX8g051129 | LOC_Os08g40030 | Os08g0511200 | OsCUC3 | Detail |
| C2H8g05688 | 8:21,481,365-21,481,889 | - | - | - | LOC_Os08g40060 | Os08g0511400 | - | Detail |
| C2H8g00208 | 8:21,485,693-21,486,067 | - | - | CX9g055236 | LOC_Os08g40080 | Os08g0511600 | - | Detail |
| C2H8g22517 | 8:21,489,438-21,491,523 | - | C1H8g05784 | CX8g054013 | LOC_Os08g40090 | Os08g0511700 | OsIRL4, pi55-1, pi55(t) | Detail |
| C2H8g28624 | 8:21,504,166-21,505,877 | - | C1H8g17789 | CX9g056061 | LOC_Os08g40100 | Os08g0511800 | - | Detail |
| C2H8g22216 | 8:21,507,099-21,510,970 | - | C1H8g17303 | CX8g054792 | LOC_Os08g40110 | Os08g0511900 | - | Detail |
| C2H8g01912 | 8:21,519,134-21,522,061 | + | C1H8g13566 | CX8g051208 | LOC_Os08g40120 | Os08g0512100 | - | Detail |
| C2H8g13020 | 8:21,523,792-21,524,916 | + | C1H8g25106 | CX8g053994 | LOC_Os08g40130 | Os08g0512200 | - | Detail |
| C2H8g21906 | 8:21,525,670-21,529,138 | + | C1H8g00693 | CX8g053394 | LOC_Os08g40140 | Os08g0512300 | - | Detail |
| C2H8g05099 | 8:21,529,454-21,533,802 | - | C1H8g20441 | CX8g053561 | LOC_Os08g40150 | Os08g0512400 | OsAHL16 | Detail |
| C2H8g28028 | 8:21,540,038-21,542,494 | + | C1H8g06615 | CX8g050659 | LOC_Os08g40160 | Os08g0512500 | - | Detail |
| C2H8g01482 | 8:21,543,826-21,545,433 | + | C1H8g24588 | CX8g050792 | LOC_Os08g40170 | Os08g0512600 | CDKB2;1, Orysa;CDKB2;1, OsCDKB2;1, cdc2Os3, Orysa;CDKB;2 | Detail |
| C2H8g01373 | 8:21,550,733-21,555,287 | + | C1H8g03467 | CX8g051014 | LOC_Os08g40180 | Os08g0512700 | - | Detail |
| C2H8g25544 | 8:21,558,129-21,559,746 | + | C1H8g18158 | - | LOC_Os08g40190 | Os08g0512900 | - | Detail |
| C2H8g24125 | 8:21,561,966-21,565,722 | + | C1H8g01845 | CX8g054165 | LOC_Os08g40200 | Os08g0513000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |