| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15948 | 5:21,545,208-21,546,632 | - | C2H5g21081 | CX5g039408 | LOC_Os05g45430 | Os05g0530701 | - | Detail |
| C1H5g13864 | 5:21,556,771-21,557,199 | + | C2H5g25354 | CX5g038460 | LOC_Os05g45450 | Os05g0531100 | OsS40-1 | Detail |
| C1H5g08591 | 5:21,560,157-21,566,574 | + | - | CX5g037195 | - | - | - | Detail |
| C1H5g28002 | 5:21,562,952-21,566,598 | - | - | - | - | - | - | Detail |
| C1H5g03559 | 5:21,571,520-21,572,418 | + | C2H5g07402 | CX5g038119 | LOC_Os05g45460 | Os05g0531200 | - | Detail |
| C1H5g22321 | 5:21,577,257-21,578,275 | + | C2H5g17651 | CX5g037192 | LOC_Os05g45480 | Os05g0531400 | - | Detail |
| C1H5g15758 | 5:21,580,174-21,584,186 | + | C2H5g11219 | CX5g038581 | LOC_Os05g45490 | Os05g0531500 | - | Detail |
| C1H5g28033 | 5:21,584,878-21,585,708 | - | C2H5g15734 | CX5g037981 | LOC_Os05g45500 | Os05g0531600 | - | Detail |
| C1H5g08016 | 5:21,586,628-21,588,991 | + | C2H5g12427 | CX5g038393 | - | Os05g0531700 | - | Detail |
| C1H5g22438 | 5:21,589,354-21,592,819 | - | C2H5g24044 | CX5g038750 | LOC_Os05g45520 | Os05g0531800 | - | Detail |
| C1H5g27355 | 5:21,596,177-21,602,903 | + | C2H5g13615 | - | - | - | - | Detail |
| C1H5g04935 | 5:21,605,085-21,607,677 | - | C2H5g02345 | CX5g039224 | LOC_Os05g45570 | Os05g0532300 | - | Detail |
| C1H5g05498 | 5:21,610,852-21,613,087 | - | C2H5g12338 | CX5g040316 | LOC_Os05g45580 | Os05g0532500 | - | Detail |
| C1H5g05803 | 5:21,614,656-21,618,455 | - | C2H5g06712 | CX5g038442 | LOC_Os05g45590 | Os05g0532600 | OsHXK2 | Detail |
| C1H5g22210 | 5:21,619,745-21,620,002 | - | C2H5g30367 | CX5g039722 | LOC_Os05g45610 | Os05g0532800 | - | Detail |
| C1H5g25723 | 5:21,620,829-21,621,201 | + | C2H5g14529 | CX5g037022 | LOC_Os09g33986 | Os09g0515200 | - | Detail |
| C1H5g21932 | 5:21,622,244-21,625,426 | + | C2H5g24963 | CX5g038984 | LOC_Os05g45660 | Os05g0533100 | - | Detail |
| C1H5g22241 | 5:21,625,910-21,627,214 | - | C2H5g26779 | CX5g040305 | LOC_Os05g45670 | Os05g0533301 | - | Detail |
| C1H5g26762 | 5:21,630,489-21,634,855 | - | C2H5g19069 | CX5g037078 | LOC_Os05g45690 | Os05g0533400 | - | Detail |
| C1H5g17231 | 5:21,637,285-21,638,316 | - | C2H5g28299 | CX5g038315 | LOC_Os05g45710 | Os05g0533500 | OsSAT1;3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g12222 | 6:19,178,808-19,182,894 | + | C1H6g06781 | CX6g044842 | LOC_Os06g37000 | Os06g0566100 | - | Detail |
| C2H6g05740 | 6:19,184,459-19,186,897 | + | C1H6g20512 | CX6g045261 | LOC_Os06g37010 | Os06g0566300 | - | Detail |
| C2H6g23857 | 6:19,219,399-19,219,775 | + | - | - | - | - | - | Detail |
| C2H6g25496 | 6:19,224,710-19,226,891 | - | C1H6g02032 | CX6g045076 | LOC_Os06g37080 | Os06g0567200 | OsAAO1 | Detail |
| C2H6g10335 | 6:19,229,811-19,231,228 | + | C1H6g21176 | - | - | Os06g0566700 | - | Detail |
| C2H6g11534 | 6:19,239,649-19,241,535 | + | C1H6g17693 | CX6g041847 | LOC_Os06g37070 | Os06g0567000 | - | Detail |
| C2H6g19087 | 6:19,248,309-19,253,168 | + | C1H6g27275 | CX6g041814 | LOC_Os06g37080 | Os06g0567200 | OsAAO1 | Detail |
| C2H6g01618 | 6:19,276,972-19,280,931 | + | C1H6g21542 | CX6g044886 | LOC_Os06g37150 | Os06g0567900 | AO, OsAAO2 | Detail |
| C2H6g02242 | 6:19,281,094-19,285,497 | - | C1H6g28567 | CX6g042535 | LOC_Os06g37160 | Os06g0568000 | - | Detail |
| C2H6g07187 | 6:19,288,619-19,293,638 | - | C1H6g24215 | CX6g042255 | LOC_Os06g37180 | Os06g0568200 | - | Detail |
| C2H6g09052 | 6:19,324,948-19,333,234 | - | C1H6g14082 | CX6g041824 | LOC_Os06g37224 | Os06g0568600 | OsKOL5, CYP701A9 | Detail |
| C2H6g09927 | 6:19,357,878-19,366,181 | - | C1H6g22956 | CX6g045332 | LOC_Os06g37300 | Os06g0569500 | KO4, OsKO4, OsKOL4, KOS1, CYP701A8, OsKO2 | Detail |
| C2H6g05317 | 6:19,370,801-19,371,202 | + | C1H6g21110 | CX6g043261 | - | - | - | Detail |
| C2H6g02574 | 6:19,387,391-19,395,950 | - | C1H6g30624 | CX6g044759 | LOC_Os06g37330 | Os06g0570566 | - | Detail |
| C2H6g17532 | 6:19,407,243-19,410,630 | - | C1H6g28276 | CX6g045040 | LOC_Os06g37364 | Os06g0570100 | D35, OsKOL2, CYP701A6, OsKO2 | Detail |
| C2H6g07805 | 6:19,416,734-19,418,042 | - | C1H6g11014 | - | - | Os06g0570600 | - | Detail |
| C2H6g18371 | 6:19,426,108-19,426,558 | - | C1H6g30624 | CX6g044759 | LOC_Os06g37364 | Os06g0570100 | D35, OsKOL2, CYP701A6, OsKO2 | Detail |
| C2H6g20521 | 6:19,427,909-19,430,828 | - | C1H6g11014 | CX6g045040 | LOC_Os06g37364 | Os06g0570600 | - | Detail |
| C2H6g06249 | 6:19,449,979-19,453,345 | + | C1H6g06179 | CX6g043330 | LOC_Os06g37410 | Os06g0570900 | - | Detail |
| C2H6g25933 | 6:19,454,136-19,458,316 | - | C1H6g12983 | CX6g041937 | LOC_Os06g37420 | Os06g0571100 | OsHDAC6, HDA706 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |