| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g08772 | 5:21,033,345-21,041,073 | + | C2H5g13659 | CX5g038489 | LOC_Os05g44210 | Os05g0518600 | OsTPS1 | Detail |
| C1H5g24612 | 5:21,050,315-21,050,716 | + | C2H5g28427 | CX5g040893 | LOC_Os05g44260 | Os05g0518800 | OsS40-2 | Detail |
| C1H5g01128 | 5:21,062,880-21,063,692 | + | C2H5g28470 | CX5g040062 | LOC_Os05g44270 | Os05g0519000 | - | Detail |
| C1H5g07867 | 5:21,073,438-21,077,564 | + | C2H5g30115 | CX5g038803 | LOC_Os05g44290 | Os05g0519200 | - | Detail |
| C1H5g30314 | 5:21,078,520-21,080,986 | - | C2H5g03043 | CX5g038305 | LOC_Os05g44300 | Os05g0519300 | OsDUF50606 | Detail |
| C1H5g04824 | 5:21,084,213-21,090,835 | - | C2H5g21922 | CX5g038313 | LOC_Os05g44310 | Os05g0519400 | - | Detail |
| C1H5g25319 | 5:21,091,210-21,095,706 | - | C2H5g04929 | CX5g039441 | LOC_Os05g44320 | Os05g0519500 | - | Detail |
| C1H5g00452 | 5:21,100,341-21,105,652 | + | C2H5g22047 | CX5g038744 | LOC_Os05g44330 | Os05g0519600 | - | Detail |
| C1H5g17989 | 5:21,106,020-21,109,669 | - | C2H5g05695 | CX5g037782 | LOC_Os05g44340 | Os05g0519700 | - | Detail |
| C1H5g30392 | 5:21,110,362-21,113,474 | + | C2H5g00768 | CX5g040719 | LOC_Os05g44350 | Os05g0519800 | - | Detail |
| C1H5g16249 | 5:21,113,942-21,119,784 | - | C2H5g18682 | CX5g037061 | LOC_Os05g44360 | Os05g0519900 | - | Detail |
| C1H5g12015 | 5:21,122,393-21,124,535 | - | C2H5g28805 | CX5g038893 | LOC_Os05g44380 | Os05g0520100 | - | Detail |
| C1H5g13206 | 5:21,126,504-21,128,476 | - | C2H5g23024 | CX5g039614 | LOC_Os05g44390 | Os05g0520200 | - | Detail |
| C1H5g27133 | 5:21,134,556-21,136,630 | + | C2H5g29984 | CX5g041084 | LOC_Os05g44400 | Os05g0520300 | - | Detail |
| C1H5g30703 | 5:21,147,572-21,148,556 | + | C2H5g01469 | CX5g037559 | LOC_Os05g44410 | Os05g0202600 | - | Detail |
| C1H5g26951 | 5:21,166,455-21,167,405 | + | C2H5g12159 | CX5g037160 | LOC_Os05g44420 | Os05g0520600 | - | Detail |
| C1H5g09160 | 5:21,189,885-21,192,456 | + | C2H5g11007 | CX2g020717 | LOC_Os05g44550 | - | - | Detail |
| C1H5g15943 | 5:21,194,908-21,202,479 | - | C2H5g01580 | CX5g037570 | LOC_Os05g44560 | Os05g0397900 | - | Detail |
| C1H5g15028 | 5:21,204,968-21,207,391 | - | C2H5g06721 | CX5g040762 | LOC_Os05g44570 | Os05g0521300 | - | Detail |
| C1H5g27271 | 5:21,211,448-21,215,028 | + | C2H5g11284 | CX5g040709 | - | Os05g0521400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00076 | 3:8,821,643-8,824,285 | + | C1H3g16506 | CX3g029623 | LOC_Os03g17990 | Os03g0289200 | - | Detail |
| C2H3g12597 | 3:8,827,655-8,831,012 | + | C1H3g21351 | CX3g025090 | LOC_Os03g18010 | Os03g0289300 | - | Detail |
| C2H3g05021 | 3:8,831,918-8,833,281 | + | C1H3g12635 | CX3g029991 | LOC_Os03g18020 | Os03g0289400 | - | Detail |
| C2H3g09473 | 3:8,839,795-8,844,816 | - | C1H3g24871 | CX3g030981 | LOC_Os03g18030 | Os03g0289800 | OsLDOX2 | Detail |
| C2H3g08584 | 3:8,867,101-8,870,248 | - | C1H3g18241 | CX3g025852 | LOC_Os03g18070 | Os03g0290300 | OsFAD7 | Detail |
| C2H3g10954 | 3:8,876,151-8,877,043 | - | C1H3g19780 | - | - | Os03g0290400 | - | Detail |
| C2H3g13012 | 3:8,877,967-8,885,760 | - | C1H3g18917 | CX3g025324 | LOC_Os03g18080 | Os03g0290500 | - | Detail |
| C2H3g23225 | 3:8,891,979-8,893,790 | + | C1H3g30153 | CX3g026472 | LOC_Os03g18110 | Os03g0290900 | - | Detail |
| C2H3g10304 | 3:8,902,619-8,906,132 | + | C1H3g18009 | CX3g026408 | LOC_Os03g18120 | Os03g0291200 | - | Detail |
| C2H3g15096 | 3:8,906,050-8,910,344 | - | C1H3g24409 | CX3g030158 | LOC_Os03g18130 | Os03g0291500 | ASN1, OsASN1, OsAS1, AS1 | Detail |
| C2H3g11917 | 3:8,933,332-8,938,306 | + | C1H3g22391 | CX3g029744 | LOC_Os03g18140 | Os03g0291800 | - | Detail |
| C2H3g26678 | 3:8,946,414-8,948,421 | + | C1H3g05911 | CX3g026643 | LOC_Os03g18150 | Os03g0292100 | - | Detail |
| C2H3g20112 | 3:8,957,779-8,960,090 | + | C1H3g07369 | CX3g027477 | LOC_Os03g18160 | Os03g0292200 | - | Detail |
| C2H3g05672 | 3:8,970,630-8,972,015 | + | C1H3g17889 | CX3g030839 | LOC_Os03g18170 | Os03g0292700 | - | Detail |
| C2H3g30223 | 3:8,974,461-8,976,844 | - | C1H3g01237 | CX3g025459 | LOC_Os03g18180 | Os03g0292800 | - | Detail |
| C2H3g08063 | 3:8,977,738-8,978,617 | + | C1H3g01195 | CX3g030714 | - | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g00182 | 3:8,980,116-8,989,686 | - | C1H3g09425 | CX3g026640 | LOC_Os03g18190 | Os03g0292900 | - | Detail |
| C2H3g24196 | 3:8,992,468-8,997,478 | + | C1H3g30417 | CX3g027666 | LOC_Os03g18200 | Os03g0293000 | - | Detail |
| C2H3g19840 | 3:8,998,182-8,999,327 | + | C1H3g18813 | CX3g029007 | LOC_Os03g18200 | Os03g0293100 | - | Detail |
| C2H3g15900 | 3:9,001,550-9,004,961 | + | C1H3g03257 | CX3g030471 | LOC_Os03g18210 | Os03g0293400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |