| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20589 | 5:20,905,867-20,906,226 | - | C2H5g19371 | CX5g039772 | - | Os05g0516100 | - | Detail |
| C1H5g26916 | 5:20,910,102-20,911,889 | + | C2H5g04233 | CX5g039979 | LOC_Os05g44020 | Os05g0516300 | - | Detail |
| C1H5g24467 | 5:20,917,898-20,918,944 | - | C2H5g15773 | CX5g039876 | - | Os05g0516475 | - | Detail |
| C1H5g15470 | 5:20,919,374-20,922,205 | + | C2H5g13797 | CX5g038417 | LOC_Os05g44030 | Os05g0516400 | - | Detail |
| C1H5g19283 | 5:20,922,718-20,923,179 | + | C2H5g13797 | CX5g038417 | LOC_Os05g44030 | Os05g0516400 | - | Detail |
| C1H5g14981 | 5:20,925,289-20,927,980 | + | C2H5g04641 | CX5g039493 | LOC_Os05g44050 | Os05g0516600 | OsRab7, OsRab7B3 | Detail |
| C1H5g10610 | 5:20,929,789-20,930,316 | + | C2H5g05743 | CX5g041146 | LOC_Os05g44060 | Os05g0516700 | - | Detail |
| C1H5g20151 | 5:20,931,064-20,931,702 | - | C2H5g24588 | CX5g039048 | LOC_Os05g44070 | Os05g0516800 | - | Detail |
| C1H5g21266 | 5:20,940,354-20,940,614 | - | C2H5g24588 | CX5g039048 | LOC_Os05g44070 | Os05g0516800 | - | Detail |
| C1H5g05035 | 5:20,942,661-20,948,548 | + | C2H5g20039 | CX5g039615 | LOC_Os05g44080 | Os05g0516900 | OsMac3 | Detail |
| C1H5g21400 | 5:20,949,458-20,950,402 | - | C2H5g04869 | CX5g038718 | LOC_Os05g44090 | Os05g0517100 | - | Detail |
| C1H5g00428 | 5:20,956,119-20,960,926 | + | C2H5g18358 | CX5g040204 | LOC_Os05g44100 | Os05g0517200 | - | Detail |
| C1H5g00439 | 5:20,964,090-20,965,132 | + | C2H5g21345 | CX5g037887 | LOC_Os05g44120 | Os05g0517400 | - | Detail |
| C1H5g15240 | 5:20,966,912-20,971,099 | - | C2H5g27310 | CX5g040072 | LOC_Os05g44130 | Os05g0517500 | - | Detail |
| C1H5g27527 | 5:20,972,270-20,975,554 | - | C2H5g03251 | CX5g039695 | LOC_Os05g44140 | Os05g0517600 | Hb5 | Detail |
| C1H5g21769 | 5:20,976,669-20,978,873 | + | C2H5g27370 | CX5g040040 | LOC_Os05g44160 | Os05g0517800 | - | Detail |
| C1H5g08677 | 5:20,979,685-20,980,923 | + | C2H5g00950 | CX5g037606 | LOC_Os05g44170 | Os05g0517900 | - | Detail |
| C1H5g28867 | 5:20,982,079-20,982,889 | - | C2H5g12138 | CX5g039831 | LOC_Os05g44180 | Os05g0518000 | OsFTL10 | Detail |
| C1H5g21350 | 5:20,992,158-20,996,646 | + | C2H5g05606 | CX5g040142 | LOC_Os05g44190 | Os05g0518200 | - | Detail |
| C1H5g09247 | 5:20,998,142-21,000,116 | - | C2H5g18484 | CX5g037767 | LOC_Os05g44200 | Os05g0518300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g26358 | 4:19,658,582-19,660,655 | + | C1H4g08631 | CX4g034762 | LOC_Os04g38430 | Os04g0422300 | - | Detail |
| C2H4g10358 | 4:19,665,391-19,670,899 | - | C1H4g00981 | CX4g033571 | LOC_Os04g38450 | Os04g0457500 | - | Detail |
| C2H4g28109 | 4:19,676,090-19,677,051 | + | C1H4g26009 | CX4g035584 | LOC_Os04g38470 | Os04g0457700 | - | Detail |
| C2H4g10126 | 4:19,677,815-19,683,151 | - | C1H4g29579 | CX4g035155 | LOC_Os04g38480 | Os04g0457800 | - | Detail |
| C2H4g10164 | 4:19,696,428-19,702,107 | + | C1H4g23002 | CX4g036175 | LOC_Os04g38520 | Os04g0458200 | - | Detail |
| C2H4g00520 | 4:19,704,109-19,707,115 | + | C1H4g04715 | CX4g036090 | LOC_Os04g38530 | Os04g0458300 | - | Detail |
| C2H4g29750 | 4:19,709,674-19,712,888 | + | C1H4g12477 | CX4g032972 | LOC_Os04g38540 | Os04g0458600 | - | Detail |
| C2H4g03798 | 4:19,716,143-19,717,447 | - | C1H4g27879 | CX4g034144 | LOC_Os04g38550 | Os04g0458800 | - | Detail |
| C2H4g07395 | 4:19,718,172-19,719,878 | - | C1H4g28360 | CX4g035860 | LOC_Os04g38560 | Os04g0458900 | OsPME14 | Detail |
| C2H4g12838 | 4:19,723,159-19,729,490 | - | C1H4g06452 | CX4g032809 | LOC_Os04g38570 | Os04g0459000 | MDR13, OsABCB14, OsPGP14, OsMDR13, OsABCB14_1, OsABCB14_2 | Detail |
| C2H4g10950 | 4:19,744,366-19,746,274 | + | C1H4g09842 | CX4g031630 | LOC_Os04g38600 | Os04g0459500 | - | Detail |
| C2H4g21093 | 4:19,746,509-19,749,266 | - | C1H4g22419 | CX4g035534 | LOC_Os04g38610 | Os04g0459600 | - | Detail |
| C2H4g24510 | 4:19,749,291-19,750,992 | - | - | - | - | - | - | Detail |
| C2H4g29769 | 4:19,751,003-19,754,314 | - | C1H4g02624 | CX4g031435 | LOC_Os04g38620 | Os04g0459700 | - | Detail |
| C2H4g23801 | 4:19,757,519-19,760,997 | - | C1H4g06613 | CX4g032546 | LOC_Os04g38630 | Os04g0459800 | - | Detail |
| C2H4g04441 | 4:19,762,881-19,768,293 | + | C1H4g08376 | CX4g034165 | LOC_Os04g38640 | Os04g0459900 | - | Detail |
| C2H4g18648 | 4:19,769,750-19,770,073 | + | - | CX4g034535 | LOC_Os04g38650 | Os04g0460050 | - | Detail |
| C2H4g25768 | 4:19,784,882-19,787,337 | + | C1H4g19139 | CX4g035386 | LOC_Os04g38670 | Os04g0460200 | OsATL14, Bh4 | Detail |
| C2H4g01029 | 4:19,794,403-19,796,468 | + | C1H4g00598 | CX4g036106 | LOC_Os04g38680 | Os04g0460300 | - | Detail |
| C2H4g03365 | 4:19,797,478-19,797,639 | - | - | CX4g034602 | - | Os04g0460350 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |