| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20589 | 5:20,905,867-20,906,226 | - | C2H5g19371 | CX5g039772 | - | Os05g0516100 | - | Detail |
| C1H5g26916 | 5:20,910,102-20,911,889 | + | C2H5g04233 | CX5g039979 | LOC_Os05g44020 | Os05g0516300 | - | Detail |
| C1H5g24467 | 5:20,917,898-20,918,944 | - | C2H5g15773 | CX5g039876 | - | Os05g0516475 | - | Detail |
| C1H5g15470 | 5:20,919,374-20,922,205 | + | C2H5g13797 | CX5g038417 | LOC_Os05g44030 | Os05g0516400 | - | Detail |
| C1H5g19283 | 5:20,922,718-20,923,179 | + | C2H5g13797 | CX5g038417 | LOC_Os05g44030 | Os05g0516400 | - | Detail |
| C1H5g14981 | 5:20,925,289-20,927,980 | + | C2H5g04641 | CX5g039493 | LOC_Os05g44050 | Os05g0516600 | OsRab7, OsRab7B3 | Detail |
| C1H5g10610 | 5:20,929,789-20,930,316 | + | C2H5g05743 | CX5g041146 | LOC_Os05g44060 | Os05g0516700 | - | Detail |
| C1H5g20151 | 5:20,931,064-20,931,702 | - | C2H5g24588 | CX5g039048 | LOC_Os05g44070 | Os05g0516800 | - | Detail |
| C1H5g21266 | 5:20,940,354-20,940,614 | - | C2H5g24588 | CX5g039048 | LOC_Os05g44070 | Os05g0516800 | - | Detail |
| C1H5g05035 | 5:20,942,661-20,948,548 | + | C2H5g20039 | CX5g039615 | LOC_Os05g44080 | Os05g0516900 | OsMac3 | Detail |
| C1H5g21400 | 5:20,949,458-20,950,402 | - | C2H5g04869 | CX5g038718 | LOC_Os05g44090 | Os05g0517100 | - | Detail |
| C1H5g00428 | 5:20,956,119-20,960,926 | + | C2H5g18358 | CX5g040204 | LOC_Os05g44100 | Os05g0517200 | - | Detail |
| C1H5g00439 | 5:20,964,090-20,965,132 | + | C2H5g21345 | CX5g037887 | LOC_Os05g44120 | Os05g0517400 | - | Detail |
| C1H5g15240 | 5:20,966,912-20,971,099 | - | C2H5g27310 | CX5g040072 | LOC_Os05g44130 | Os05g0517500 | - | Detail |
| C1H5g27527 | 5:20,972,270-20,975,554 | - | C2H5g03251 | CX5g039695 | LOC_Os05g44140 | Os05g0517600 | Hb5 | Detail |
| C1H5g21769 | 5:20,976,669-20,978,873 | + | C2H5g27370 | CX5g040040 | LOC_Os05g44160 | Os05g0517800 | - | Detail |
| C1H5g08677 | 5:20,979,685-20,980,923 | + | C2H5g00950 | CX5g037606 | LOC_Os05g44170 | Os05g0517900 | - | Detail |
| C1H5g28867 | 5:20,982,079-20,982,889 | - | C2H5g12138 | CX5g039831 | LOC_Os05g44180 | Os05g0518000 | OsFTL10 | Detail |
| C1H5g21350 | 5:20,992,158-20,996,646 | + | C2H5g05606 | CX5g040142 | LOC_Os05g44190 | Os05g0518200 | - | Detail |
| C1H5g09247 | 5:20,998,142-21,000,116 | - | C2H5g18484 | CX5g037767 | LOC_Os05g44200 | Os05g0518300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g21742 | 12:7,953,738-7,957,203 | - | C1H12g23481 | CX12g016666 | LOC_Os12g16250 | Os12g0263600 | - | Detail |
| C2H12g09837 | 12:7,965,840-7,966,673 | - | C1H12g19638 | CX12g016756 | - | - | - | Detail |
| C2H12g28081 | 12:7,968,856-7,969,194 | + | - | CX12g018545 | LOC_Os02g35120 | Os06g0629362 | - | Detail |
| C2H12g05917 | 12:7,982,822-7,985,891 | - | C1H12g31185 | CX12g016907 | LOC_Os12g16520 | Os12g0614851 | - | Detail |
| C2H12g24177 | 12:7,993,537-7,994,355 | - | C1H12g05455 | CX12g018590 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g24213 | 12:7,994,387-7,995,226 | - | C1H12g12669 | CX12g016989 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g15577 | 12:8,037,335-8,039,673 | + | C1H12g30337 | CX12g015656 | - | - | - | Detail |
| C2H12g13855 | 12:8,065,465-8,065,944 | - | - | CX12g015139 | - | - | - | Detail |
| C2H12g13804 | 12:8,066,709-8,067,195 | + | C1H12g12690 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C2H12g25263 | 12:8,070,111-8,081,634 | + | C1H12g04576 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C2H12g29205 | 12:8,085,928-8,086,371 | + | C1H12g26358 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C2H12g22341 | 12:8,096,868-8,097,109 | + | C1H12g24303 | CX12g017950 | LOC_Os12g16370 | - | - | Detail |
| C2H12g01086 | 12:8,101,650-8,104,551 | + | C1H12g20439 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C2H12g04535 | 12:8,117,029-8,118,986 | - | C1H12g24834 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C2H12g04709 | 12:8,195,949-8,200,053 | - | C1H12g27646 | CX12g016443 | LOC_Os12g17070 | Os12g0270100 | - | Detail |
| C2H12g27718 | 12:8,205,451-8,207,208 | + | C1H12g23758 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C2H12g03089 | 12:8,213,300-8,218,084 | - | C1H12g00865 | CX12g016852 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g11132 | 12:8,238,815-8,241,615 | - | C1H12g07805 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g14706 | 12:8,247,114-8,250,863 | - | C1H12g17449 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| C2H12g04129 | 12:8,266,886-8,267,263 | - | - | CX12g018058 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |