| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g28754 | 1:23,607,123-23,619,376 | - | C2H1g07801 | CX1g006661 | LOC_Os01g46510 | Os01g0653800 | - | Detail |
| C1H1g31351 | 1:23,646,597-23,647,101 | - | - | - | - | - | - | Detail |
| C1H1g31131 | 1:23,669,116-23,676,316 | + | C2H1g26396 | CX1g006750 | LOC_Os01g46570 | Os01g0654100 | - | Detail |
| C1H1g11738 | 1:23,677,773-23,682,848 | - | C2H1g01055 | CX1g002113 | LOC_Os01g46590 | Os01g0654200 | - | Detail |
| C1H1g07135 | 1:23,682,497-23,687,028 | + | C2H1g00478 | CX1g004232 | LOC_Os01g46580 | Os01g0654300 | - | Detail |
| C1H1g04619 | 1:23,687,981-23,692,257 | - | C2H1g09838 | CX1g002075 | LOC_Os01g46610 | Os01g0654500 | - | Detail |
| C1H1g23889 | 1:23,695,972-23,696,916 | - | C2H1g17869 | CX1g005644 | LOC_Os01g46620 | - | - | Detail |
| C1H1g01145 | 1:23,704,815-23,708,740 | + | C2H1g05914 | - | LOC_Os01g46650 | Os01g0654900 | - | Detail |
| C1H1g24345 | 1:23,738,182-23,745,576 | + | C2H1g00999 | CX1g000702 | LOC_Os01g46700 | Os01g0655300 | SDG705, OsSDG705 | Detail |
| C1H1g19947 | 1:23,748,198-23,754,176 | - | C2H1g28065 | CX1g003368 | LOC_Os01g46710 | Os01g0655400 | - | Detail |
| C1H1g28980 | 1:23,758,258-23,763,653 | + | C2H1g30387 | - | LOC_Os01g46720 | Os01g0655500 | - | Detail |
| C1H1g06509 | 1:23,774,585-23,782,512 | + | C2H1g10347 | CX1g005157 | LOC_Os01g46750 | Os01g0655800 | - | Detail |
| C1H1g10344 | 1:23,793,329-23,798,327 | + | C2H1g01219 | CX1g001306 | LOC_Os01g46760 | Os01g0656200 | OsPP2C8 | Detail |
| C1H1g15601 | 1:23,806,716-23,807,930 | - | C2H1g14070 | CX1g006460 | LOC_Os01g46800 | Os01g0656400 | - | Detail |
| C1H1g28624 | 1:23,820,920-23,827,657 | - | C2H1g24475 | CX1g005546 | LOC_Os01g46810 | Os01g0656600 | - | Detail |
| C1H1g31021 | 1:23,835,301-23,839,137 | + | C2H1g08798 | CX1g002002 | LOC_Os01g46840 | Os01g0656900 | - | Detail |
| C1H1g21539 | 1:23,840,054-23,842,127 | + | C2H1g22347 | CX1g004768 | LOC_Os01g46850 | Os01g0657000 | - | Detail |
| C1H1g07661 | 1:23,842,836-23,844,596 | - | C2H1g08096 | CX1g000538 | LOC_Os01g46860 | Os01g0657100 | PT11, OsPT11, PHT1-11, OsPht1;11, ORYsa;PHT1;11 | Detail |
| C1H1g13139 | 1:23,882,417-23,885,239 | - | C2H1g24228 | CX1g006603 | LOC_Os01g46926 | Os01g0658400 | UBC5A, OsUBC5a, OsUBC14, UBC14 | Detail |
| C1H1g10996 | 1:23,886,285-23,889,881 | - | C2H1g04871 | CX1g000846 | LOC_Os01g46932 | Os01g0658500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g27377 | 2:31,147,215-31,151,596 | + | C1H2g22350 | CX2g022127 | LOC_Os02g55910 | Os02g0802700 | OsMGD2 | Detail |
| C2H2g20108 | 2:31,156,425-31,156,652 | + | C1H8g21125 | CX8g052993 | - | - | - | Detail |
| C2H2g19776 | 2:31,161,375-31,164,320 | + | C1H2g19124 | CX2g023429 | LOC_Os02g55940 | Os02g0803200 | - | Detail |
| C2H2g02168 | 2:31,164,868-31,173,358 | + | C1H2g20796 | CX2g020375 | LOC_Os02g55950 | Os02g0803250 | - | Detail |
| C2H2g12868 | 2:31,165,042-31,169,443 | - | C1H2g16610 | - | - | - | - | Detail |
| C2H2g09719 | 2:31,177,748-31,181,206 | + | C1H2g28140 | CX2g020265 | LOC_Os02g55970 | Os02g0803300 | - | Detail |
| C2H2g22479 | 2:31,182,000-31,182,890 | - | C1H2g29422 | CX2g018868 | LOC_Os02g55980 | Os02g0803400 | - | Detail |
| C2H2g05755 | 2:31,184,987-31,186,499 | + | C1H2g14622 | CX2g022206 | LOC_Os02g55990 | Os02g0803600 | - | Detail |
| C2H2g01956 | 2:31,186,968-31,190,821 | - | C1H2g12587 | CX2g021842 | LOC_Os02g56000 | Os02g0803700 | - | Detail |
| C2H2g27448 | 2:31,222,073-31,222,944 | - | C1H6g22975 | CX2g021501 | LOC_Os02g56014 | Os02g0804100 | - | Detail |
| C2H2g02958 | 2:31,222,585-31,225,421 | + | C1H2g20947 | CX2g023214 | LOC_Os02g56020 | Os02g0804300 | - | Detail |
| C2H2g06460 | 2:31,225,608-31,226,339 | + | C1H2g11666 | CX2g019813 | LOC_Os02g56030 | Os02g0804400 | - | Detail |
| C2H2g06255 | 2:31,226,706-31,233,843 | - | C1H2g07400 | CX2g020092 | LOC_Os02g56040 | Os02g0804500 | OsDjA2 | Detail |
| C2H2g30585 | 2:31,235,588-31,239,035 | - | C1H2g26632 | CX2g021763 | LOC_Os02g56050 | Os02g0804600 | - | Detail |
| C2H2g02634 | 2:31,240,060-31,242,017 | + | C1H2g22511 | - | LOC_Os02g56090 | Os02g0804800 | - | Detail |
| C2H2g25841 | 2:31,243,789-31,248,191 | + | C1H2g22356 | CX2g021393 | LOC_Os02g56100 | Os02g0804900 | RNRL2 | Detail |
| C2H2g24175 | 2:31,251,377-31,259,875 | - | C1H2g06681 | CX2g021776 | LOC_Os02g56110 | Os02g0805000 | - | Detail |
| C2H2g17406 | 2:31,265,696-31,266,498 | + | C1H2g26955 | CX2g023851 | LOC_Os02g56120 | Os02g0805100 | - | Detail |
| C2H2g05865 | 2:31,268,106-31,269,817 | + | C1H2g10518 | CX2g022924 | LOC_Os02g56130 | Os02g0805200 | OsPCNA | Detail |
| C2H2g03605 | 2:31,271,138-31,272,864 | - | C1H2g21301 | CX2g024641 | LOC_Os02g56140 | Os02g0805250 | OsbHLH107 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |