| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02984 | 5:20,766,428-20,768,903 | + | C2H5g16900 | CX5g039008 | LOC_Os05g43760 | Os05g0513100 | - | Detail |
| C1H5g10552 | 5:20,777,045-20,782,300 | + | C2H5g24258 | CX5g040071 | LOC_Os05g43770 | Os05g0513200 | - | Detail |
| C1H5g13302 | 5:20,784,428-20,787,309 | + | C2H5g09149 | CX5g039684 | LOC_Os05g43780 | Os05g0513350 | - | Detail |
| C1H5g09663 | 5:20,788,710-20,792,239 | + | C2H5g26918 | CX5g038930 | LOC_Os05g43790 | Os05g0513400 | - | Detail |
| C1H5g15162 | 5:20,796,959-20,798,329 | - | C2H5g05557 | CX5g036821 | LOC_Os05g43800 | Os05g0513600 | - | Detail |
| C1H5g20443 | 5:20,798,855-20,801,474 | - | C2H5g13727 | CX5g036949 | LOC_Os05g43810 | Os05g0513700 | - | Detail |
| C1H5g18479 | 5:20,805,058-20,806,808 | + | C2H5g12600 | CX5g036780 | LOC_Os05g43820 | Os05g0513800 | - | Detail |
| C1H5g21593 | 5:20,807,193-20,810,906 | - | C2H5g13306 | CX5g040516 | LOC_Os05g43830 | Os05g0513900 | - | Detail |
| C1H5g29251 | 5:20,819,862-20,821,397 | + | C2H5g05539 | CX5g039381 | LOC_Os05g43840 | Os05g0514200 | - | Detail |
| C1H5g31291 | 5:20,827,649-20,832,191 | + | C2H5g17185 | CX5g039707 | LOC_Os05g43850 | Os05g0514300 | - | Detail |
| C1H5g31864 | 5:20,833,121-20,835,287 | - | C2H5g21883 | CX5g039655 | LOC_Os05g43860 | Os05g0514400 | - | Detail |
| C1H5g13883 | 5:20,837,871-20,840,000 | + | C2H5g27546 | CX5g039558 | LOC_Os05g43870 | Os05g0514500 | - | Detail |
| C1H5g27703 | 5:20,845,140-20,846,294 | - | C2H5g19387 | CX5g037140 | LOC_Os05g43880 | Os05g0514600 | GA2OX4, OsGA2ox4, ga2ox 4, OsGA2ox-4 | Detail |
| C1H5g12361 | 5:20,857,303-20,857,548 | + | C2H5g15452 | CX5g039348 | LOC_Os05g43895 | Os05g0514800 | - | Detail |
| C1H5g18846 | 5:20,865,640-20,867,343 | + | C2H5g22372 | CX5g037416 | LOC_Os05g43910 | Os05g0515200 | - | Detail |
| C1H5g31857 | 5:20,876,503-20,881,955 | + | C2H5g05053 | CX5g037729 | LOC_Os05g43920 | Os05g0515400 | OsARF14, OsARF3la, OsARF3la/OsARF14 | Detail |
| C1H5g21636 | 5:20,886,010-20,887,710 | - | C2H5g07980 | CX5g038512 | LOC_Os05g43940 | Os05g0515600 | OsCOMT9 | Detail |
| C1H5g00839 | 5:20,891,917-20,895,618 | + | C2H5g04015 | CX5g037498 | LOC_Os05g43950 | Os05g0515700 | OsVOZ2 | Detail |
| C1H5g13776 | 5:20,896,372-20,898,026 | - | C2H5g16276 | CX5g039793 | LOC_Os05g43960 | Os05g0415400 | OsNAC24 | Detail |
| C1H5g03749 | 5:20,898,386-20,902,248 | + | C2H5g17758 | CX5g038707 | LOC_Os05g43970 | Os05g0515900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g07507 | 2:25,286,767-25,292,919 | - | C1H2g08635 | CX2g019043 | LOC_Os02g44975 | Os02g0670700 | - | Detail |
| C2H2g00797 | 2:25,297,624-25,298,892 | + | C1H2g21963 | CX2g024431 | LOC_Os02g44980 | Os02g0670900 | - | Detail |
| C2H2g26127 | 2:25,301,759-25,302,892 | + | - | CX2g022519 | LOC_Os02g44990 | Os02g0671100 | MAIF1 | Detail |
| C2H2g13844 | 2:25,306,266-25,307,342 | + | - | CX2g022271 | LOC_Os02g45000 | Os02g0671200 | - | Detail |
| C2H2g28093 | 2:25,310,721-25,313,614 | - | C1H2g23021 | CX2g019738 | LOC_Os02g45010 | Os02g0671300 | - | Detail |
| C2H2g25964 | 2:25,340,224-25,349,419 | + | C1H2g21457 | CX2g022320 | LOC_Os02g45054 | Os02g0672100 | OsIDD4, SID1 | Detail |
| C2H2g22467 | 2:25,354,622-25,366,880 | - | C1H2g11352 | CX2g021691 | LOC_Os02g45070 | Os02g0672200 | - | Detail |
| C2H2g05576 | 2:25,372,547-25,375,291 | + | C1H2g21284 | CX2g018829 | LOC_Os02g45080 | Os02g0168200 | - | Detail |
| C2H2g29807 | 2:25,377,533-25,382,598 | - | C1H2g30841 | CX2g020078 | LOC_Os02g45090 | Os02g0672400 | - | Detail |
| C2H2g25763 | 2:25,384,523-25,385,122 | - | - | CX2g019957 | LOC_Os02g45100 | Os02g0672500 | - | Detail |
| C2H2g23823 | 2:25,385,941-25,389,863 | + | C1H2g09721 | CX2g022558 | LOC_Os02g45110 | Os02g0672600 | OsMTA2 | Detail |
| C2H2g27864 | 2:25,392,498-25,394,051 | + | C1H2g17265 | CX2g020462 | - | Os02g0672700 | - | Detail |
| C2H2g19722 | 2:25,394,464-25,399,070 | - | C1H2g06794 | CX2g020387 | LOC_Os02g45130 | Os02g0672800 | - | Detail |
| C2H2g29141 | 2:25,407,193-25,408,387 | + | C1H2g28086 | CX2g019881 | LOC_Os02g45160 | Os02g0673100 | - | Detail |
| C2H2g27637 | 2:25,411,758-25,414,100 | - | C1H2g27166 | CX2g020832 | LOC_Os02g45160 | Os02g0673100 | - | Detail |
| C2H2g10348 | 2:25,438,290-25,443,583 | + | C1H2g11887 | CX2g024161 | LOC_Os02g45170 | Os02g0673500 | OsLHW | Detail |
| C2H2g28406 | 2:25,446,368-25,450,785 | + | C1H2g28162 | CX2g021906 | LOC_Os02g45180 | Os02g0673600 | - | Detail |
| C2H2g24261 | 2:25,459,688-25,461,879 | - | C1H2g16674 | CX2g022483 | LOC_Os02g45200 | Os02g0673700 | - | Detail |
| C2H2g25120 | 2:25,488,809-25,489,135 | - | - | CX2g024043 | LOC_Os02g45225 | Os02g0674233 | - | Detail |
| C2H2g23214 | 2:25,496,526-25,500,863 | - | C1H2g05896 | CX2g023908 | LOC_Os02g45240 | Os02g0674700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |