| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15170 | 5:20,646,146-20,648,964 | + | C2H5g29168 | CX5g039522 | - | - | - | Detail |
| C1H5g30650 | 5:20,654,270-20,659,494 | + | C2H5g01065 | CX5g037054 | LOC_Os05g43610 | Os05g0512000 | - | Detail |
| C1H5g28010 | 5:20,661,767-20,663,400 | + | C2H5g14988 | CX5g038702 | LOC_Os05g43590 | Os05g0511800 | - | Detail |
| C1H5g12550 | 5:20,664,428-20,667,136 | - | C2H5g08259 | CX5g037699 | LOC_Os05g43582 | Os05g0511700 | - | Detail |
| C1H5g02902 | 5:20,668,097-20,670,188 | - | C2H5g13482 | CX5g037939 | LOC_Os05g43576 | Os05g0511500 | - | Detail |
| C1H5g20408 | 5:20,673,211-20,673,846 | - | C2H10g16136 | - | - | - | - | Detail |
| C1H5g23395 | 5:20,675,906-20,683,777 | + | C2H5g00019 | CX5g039648 | LOC_Os05g43570 | Os05g0511400 | - | Detail |
| C1H5g31163 | 5:20,684,387-20,693,882 | + | C2H5g01181 | CX5g038876 | LOC_Os05g43560 | Os05g0511300 | - | Detail |
| C1H5g31608 | 5:20,696,464-20,697,765 | - | C2H5g05981 | CX5g038504 | LOC_Os05g43550 | Os05g0511050 | - | Detail |
| C1H5g23826 | 5:20,702,998-20,705,827 | - | C2H5g08192 | CX5g036939 | LOC_Os05g43540 | Os05g0511000 | - | Detail |
| C1H5g22389 | 5:20,714,273-20,714,908 | + | C2H10g16136 | - | - | - | - | Detail |
| C1H5g01984 | 5:20,715,199-20,718,871 | + | C2H5g06890 | CX5g041060 | LOC_Os05g43530 | Os05g0510800 | OsCSLC7 | Detail |
| C1H5g13246 | 5:20,720,651-20,724,353 | - | C2H5g29614 | CX5g039667 | LOC_Os05g43520 | Os05g0510700 | - | Detail |
| C1H5g03553 | 5:20,727,482-20,728,000 | + | C2H5g06953 | CX5g040965 | LOC_Os05g43640 | Os05g0512100 | - | Detail |
| C1H5g21736 | 5:20,730,709-20,733,478 | + | C2H5g26211 | CX5g040742 | LOC_Os05g43650 | Os05g0512200 | - | Detail |
| C1H5g03468 | 5:20,736,103-20,736,477 | - | C2H5g29981 | - | LOC_Os05g43660 | Os05g0512301 | - | Detail |
| C1H5g20040 | 5:20,739,046-20,740,377 | - | C2H5g13083 | CX5g040726 | LOC_Os05g43670 | Os05g0512400 | - | Detail |
| C1H5g16395 | 5:20,740,414-20,740,625 | - | - | - | - | - | - | Detail |
| C1H5g16936 | 5:20,741,445-20,745,241 | - | C2H5g21303 | - | LOC_Os05g43680 | Os05g0512500 | OsMRGBP | Detail |
| C1H5g08173 | 5:20,749,479-20,751,961 | + | C2H5g03611 | CX5g037888 | LOC_Os05g43690 | Os05g0512600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24523 | 4:20,368,391-20,369,323 | - | C1H4g31685 | CX4g035066 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| C2H4g28567 | 4:20,369,334-20,371,687 | - | C1H4g31685 | CX4g035066 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| C2H4g26351 | 4:20,375,278-20,376,191 | - | - | - | - | Os04g0471700 | - | Detail |
| C2H4g00702 | 4:20,384,174-20,385,460 | - | C1H4g16030 | CX4g033693 | LOC_Os04g39590 | Os04g0472100 | - | Detail |
| C2H4g03647 | 4:20,385,815-20,386,597 | - | C1H4g16030 | CX4g032102 | LOC_Os04g39600 | Os04g0472200 | - | Detail |
| C2H4g19420 | 4:20,393,577-20,398,039 | + | C1H4g00073 | CX4g034292 | LOC_Os04g39610 | Os04g0472300 | - | Detail |
| C2H4g22876 | 4:20,403,160-20,410,476 | + | C1H4g27433 | CX4g035839 | LOC_Os04g39629 | Os04g0472400 | - | Detail |
| C2H4g21465 | 4:20,413,737-20,416,103 | + | C1H4g18621 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C2H4g05936 | 4:20,417,104-20,417,445 | + | C1H4g18621 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C2H4g04802 | 4:20,418,030-20,419,619 | - | C1H4g12075 | CX4g036049 | LOC_Os04g39660 | - | - | Detail |
| C2H4g02841 | 4:20,419,839-20,422,233 | + | C1H4g21886 | CX4g035542 | LOC_Os04g39670 | Os04g0472700 | - | Detail |
| C2H4g28146 | 4:20,424,851-20,427,436 | + | - | CX4g033721 | LOC_Os04g39680 | Os04g0472900 | - | Detail |
| C2H4g20727 | 4:20,427,911-20,430,021 | - | C1H4g18594 | CX4g031996 | LOC_Os04g39700 | Os04g0473400 | RPL6 | Detail |
| C2H4g02603 | 4:20,431,637-20,432,138 | - | C1H4g22390 | CX4g036319 | LOC_Os04g39770 | Os04g0473800 | FCP1, FCP1/OsCLE402, Os CLE402, OsCLE402 | Detail |
| C2H4g23069 | 4:20,438,019-20,447,937 | - | C1H4g00302 | CX4g034400 | LOC_Os04g39780 | Os04g0473900 | DWA1 | Detail |
| C2H4g27268 | 4:20,465,053-20,466,506 | - | C1H4g22436 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C2H4g08296 | 4:20,468,818-20,469,627 | - | C1H4g30851 | - | LOC_Os04g39840 | Os04g0474300 | - | Detail |
| C2H4g06810 | 4:20,472,789-20,478,079 | - | C1H4g08294 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C2H4g06498 | 4:20,479,799-20,485,888 | - | C1H4g25243 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C2H4g26901 | 4:20,489,101-20,494,194 | - | C1H4g24332 | - | LOC_Os04g39880 | Os04g0474800 | OsTAGG2, Os4BGlu12 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |