| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20863 | 5:20,315,791-20,319,332 | - | C2H5g01889 | CX5g039451 | LOC_Os05g42300 | Os05g0502800 | - | Detail |
| C1H5g12553 | 5:20,322,586-20,323,047 | + | C2H5g24320 | CX5g038016 | - | - | - | Detail |
| C1H5g02982 | 5:20,327,590-20,328,224 | - | C2H5g17995 | - | - | - | - | Detail |
| C1H5g23445 | 5:20,329,894-20,335,922 | - | C2H5g12051 | CX5g036854 | LOC_Os05g42330 | Os05g0503000 | - | Detail |
| C1H5g08819 | 5:20,338,894-20,339,802 | + | C2H5g11517 | CX5g038805 | LOC_Os05g42340 | Os05g0503100 | - | Detail |
| C1H5g25114 | 5:20,341,511-20,346,507 | - | C2H5g22444 | CX5g039611 | LOC_Os05g42350 | Os05g0503300 | - | Detail |
| C1H5g14084 | 5:20,348,141-20,349,559 | - | C2H5g05864 | - | LOC_Os05g42360 | - | - | Detail |
| C1H5g03299 | 5:20,396,339-20,398,263 | - | C2H5g04107 | CX5g040265 | LOC_Os05g43030 | Os05g0505900 | - | Detail |
| C1H5g03689 | 5:20,406,081-20,408,331 | + | C2H5g04456 | CX5g037777 | LOC_Os05g43040 | Os05g0506000 | - | Detail |
| C1H5g13929 | 5:20,409,244-20,410,298 | - | C2H5g11826 | CX5g039788 | LOC_Os05g43050 | Os05g0345700 | - | Detail |
| C1H5g16325 | 5:20,412,281-20,423,297 | + | C2H5g03697 | CX5g037317 | LOC_Os05g43060 | Os05g0506200 | - | Detail |
| C1H5g14740 | 5:20,431,862-20,433,709 | - | C2H5g00054 | CX5g038198 | LOC_Os05g43090 | Os05g0506450 | - | Detail |
| C1H5g02333 | 5:20,434,671-20,437,027 | - | C2H5g02904 | CX5g038198 | LOC_Os05g43100 | Os05g0506600 | - | Detail |
| C1H5g15254 | 5:20,449,296-20,449,945 | - | C2H5g15132 | CX5g038198 | LOC_Os05g43100 | Os05g0506500 | - | Detail |
| C1H5g17334 | 5:20,451,746-20,454,793 | - | C2H5g18861 | CX5g038198 | LOC_Os05g43110 | Os05g0506450 | - | Detail |
| C1H5g04181 | 5:20,458,092-20,460,585 | - | C2H5g12001 | CX5g038198 | LOC_Os05g43120 | Os05g0506800 | - | Detail |
| C1H5g14528 | 5:20,462,882-20,464,726 | - | C2H5g02931 | CX5g039806 | LOC_Os05g43130 | Os05g0506900 | - | Detail |
| C1H5g19105 | 5:20,469,228-20,469,719 | + | C2H5g18462 | - | LOC_Os05g43140 | Os05g0507000 | - | Detail |
| C1H5g01942 | 5:20,471,596-20,472,376 | + | - | - | - | - | - | Detail |
| C1H5g16549 | 5:20,473,368-20,477,672 | + | C2H5g14601 | CX5g038837 | LOC_Os05g43170 | Os05g0507300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25383 | 1:6,016,659-6,017,612 | - | C1H1g19662 | CX1g004809 | LOC_Os01g12400 | Os01g0223800 | SDRLK-ESG1, OsESG1 | Detail |
| C2H1g06877 | 1:6,018,080-6,018,949 | - | C1H1g02057 | CX1g004809 | LOC_Os01g12410 | Os01g0223800 | SDRLK-ESG1, OsESG1 | Detail |
| C2H1g00939 | 1:6,023,568-6,028,266 | - | C1H1g04603 | - | - | - | - | Detail |
| C2H1g15856 | 1:6,029,178-6,031,628 | + | C1H1g19662 | CX1g003236 | LOC_Os01g12420 | Os01g0223900 | SDRLK-47 | Detail |
| C2H1g29853 | 1:6,033,552-6,035,954 | - | C1H1g19662 | CX1g002105 | LOC_Os01g12430 | Os01g0224000 | SDRLK-48 | Detail |
| C2H1g22176 | 1:6,055,467-6,056,612 | + | C1H1g08851 | CX1g003851 | LOC_Os01g12440 | Os01g0224100 | - | Detail |
| C2H1g17446 | 1:6,073,162-6,075,817 | - | C1H1g10595 | CX1g003329 | LOC_Os01g12460 | Os01g0224200 | - | Detail |
| C2H1g06705 | 1:6,076,291-6,077,687 | + | C1H1g28759 | CX1g007058 | LOC_Os01g12464 | Os01g0224300 | - | Detail |
| C2H1g14688 | 1:6,079,484-6,082,353 | + | C1H1g07004 | CX1g001394 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| C2H1g11914 | 1:6,084,157-6,086,154 | - | C1H1g12177 | CX1g003539 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| C2H1g03625 | 1:6,101,830-6,105,532 | + | C1H1g07815 | CX1g002397 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| C2H1g01358 | 1:6,126,666-6,129,350 | - | C1H1g11599 | CX1g005063 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| C2H1g06869 | 1:6,136,314-6,143,339 | + | C1H1g06137 | CX1g001955 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| C2H1g08071 | 1:6,144,690-6,151,484 | + | C1H1g01658 | CX1g004081 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| C2H1g21338 | 1:6,151,761-6,156,636 | + | C1H1g10876 | CX1g000643 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| C2H1g20462 | 1:6,157,508-6,159,650 | - | C1H1g09440 | CX1g000722 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| C2H1g08221 | 1:6,160,616-6,162,617 | - | C1H1g18546 | CX1g001058 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| C2H1g14460 | 1:6,169,478-6,169,933 | - | C1H1g27681 | CX1g004401 | LOC_Os01g12580 | Os01g0225600 | OsLea14-A | Detail |
| C2H1g14647 | 1:6,189,662-6,190,985 | - | C1H1g11055 | CX1g003331 | LOC_Os01g12640 | Os01g0226200 | - | Detail |
| C2H1g27972 | 1:6,195,228-6,195,593 | - | C1H11g06426 | CX1g002909 | - | Os11g0702600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |