| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20863 | 5:20,315,791-20,319,332 | - | C2H5g01889 | CX5g039451 | LOC_Os05g42300 | Os05g0502800 | - | Detail |
| C1H5g12553 | 5:20,322,586-20,323,047 | + | C2H5g24320 | CX5g038016 | - | - | - | Detail |
| C1H5g02982 | 5:20,327,590-20,328,224 | - | C2H5g17995 | - | - | - | - | Detail |
| C1H5g23445 | 5:20,329,894-20,335,922 | - | C2H5g12051 | CX5g036854 | LOC_Os05g42330 | Os05g0503000 | - | Detail |
| C1H5g08819 | 5:20,338,894-20,339,802 | + | C2H5g11517 | CX5g038805 | LOC_Os05g42340 | Os05g0503100 | - | Detail |
| C1H5g25114 | 5:20,341,511-20,346,507 | - | C2H5g22444 | CX5g039611 | LOC_Os05g42350 | Os05g0503300 | - | Detail |
| C1H5g14084 | 5:20,348,141-20,349,559 | - | C2H5g05864 | - | LOC_Os05g42360 | - | - | Detail |
| C1H5g03299 | 5:20,396,339-20,398,263 | - | C2H5g04107 | CX5g040265 | LOC_Os05g43030 | Os05g0505900 | - | Detail |
| C1H5g03689 | 5:20,406,081-20,408,331 | + | C2H5g04456 | CX5g037777 | LOC_Os05g43040 | Os05g0506000 | - | Detail |
| C1H5g13929 | 5:20,409,244-20,410,298 | - | C2H5g11826 | CX5g039788 | LOC_Os05g43050 | Os05g0345700 | - | Detail |
| C1H5g16325 | 5:20,412,281-20,423,297 | + | C2H5g03697 | CX5g037317 | LOC_Os05g43060 | Os05g0506200 | - | Detail |
| C1H5g14740 | 5:20,431,862-20,433,709 | - | C2H5g00054 | CX5g038198 | LOC_Os05g43090 | Os05g0506450 | - | Detail |
| C1H5g02333 | 5:20,434,671-20,437,027 | - | C2H5g02904 | CX5g038198 | LOC_Os05g43100 | Os05g0506600 | - | Detail |
| C1H5g15254 | 5:20,449,296-20,449,945 | - | C2H5g15132 | CX5g038198 | LOC_Os05g43100 | Os05g0506500 | - | Detail |
| C1H5g17334 | 5:20,451,746-20,454,793 | - | C2H5g18861 | CX5g038198 | LOC_Os05g43110 | Os05g0506450 | - | Detail |
| C1H5g04181 | 5:20,458,092-20,460,585 | - | C2H5g12001 | CX5g038198 | LOC_Os05g43120 | Os05g0506800 | - | Detail |
| C1H5g14528 | 5:20,462,882-20,464,726 | - | C2H5g02931 | CX5g039806 | LOC_Os05g43130 | Os05g0506900 | - | Detail |
| C1H5g19105 | 5:20,469,228-20,469,719 | + | C2H5g18462 | - | LOC_Os05g43140 | Os05g0507000 | - | Detail |
| C1H5g01942 | 5:20,471,596-20,472,376 | + | - | - | - | - | - | Detail |
| C1H5g16549 | 5:20,473,368-20,477,672 | + | C2H5g14601 | CX5g038837 | LOC_Os05g43170 | Os05g0507300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g19767 | 8:15,121,275-15,124,496 | - | C1H8g30278 | CX8g051831 | LOC_Os08g28710 | Os08g0374701 | - | Detail |
| C2H8g22977 | 8:15,137,161-15,143,449 | - | C1H8g03479 | CX8g050795 | LOC_Os08g28730 | Os08g0374800 | Osfc24, OsUGE2, FC24/OsUGE2 | Detail |
| C2H8g13630 | 8:15,148,212-15,150,239 | - | C1H8g29557 | - | LOC_Os08g28740 | Os08g0374900 | - | Detail |
| C2H8g05259 | 8:15,150,858-15,151,166 | + | C1H8g03522 | - | - | - | - | Detail |
| C2H8g22793 | 8:15,151,403-15,151,849 | + | C1H8g21037 | CX8g051236 | - | - | - | Detail |
| C2H8g25045 | 8:15,163,933-15,165,787 | + | C1H8g29076 | CX8g051811 | LOC_Os08g29020 | Os08g0501500 | - | Detail |
| C2H8g13021 | 8:15,169,575-15,169,992 | + | - | - | - | - | - | Detail |
| C2H8g14500 | 8:15,199,178-15,203,504 | + | C1H8g18242 | CX8g054118 | LOC_Os08g28760 | Os08g0375700 | - | Detail |
| C2H8g04590 | 8:15,247,686-15,251,366 | + | C1H8g05287 | CX8g052570 | LOC_Os08g28840 | Os08g0375900 | - | Detail |
| C2H8g13625 | 8:15,256,922-15,259,854 | + | C1H8g14753 | CX8g050967 | LOC_Os08g28860 | Os08g0376200 | - | Detail |
| C2H8g14131 | 8:15,263,635-15,266,955 | - | C1H8g21009 | CX8g050470 | LOC_Os08g28870 | Os08g0376300 | - | Detail |
| C2H8g19942 | 8:15,273,609-15,276,904 | + | C1H8g02054 | CX8g054764 | LOC_Os08g28880 | Os08g0376550 | - | Detail |
| C2H8g17464 | 8:15,287,058-15,293,670 | + | C1H8g13677 | CX8g050879 | LOC_Os08g28890 | Os08g0376600 | - | Detail |
| C2H8g19076 | 8:15,298,457-15,298,695 | + | C1H8g10652 | - | - | - | - | Detail |
| C2H8g16728 | 8:15,312,119-15,316,563 | + | C1H8g03144 | CX8g053091 | LOC_Os08g28940 | Os08g0377100 | - | Detail |
| C2H8g04374 | 8:15,327,050-15,327,845 | + | C1H8g29066 | CX8g053242 | LOC_Os08g28950 | Os08g0377200 | RR12, OsRR12, Rra11, OsRR8, OsRRA11 | Detail |
| C2H8g25366 | 8:15,348,126-15,349,326 | + | C1H8g14468 | CX8g050766 | LOC_Os08g28970 | Os08g0377500 | - | Detail |
| C2H8g07044 | 8:15,349,645-15,352,586 | - | C1H8g30557 | CX8g054003 | LOC_Os08g28980 | Os08g0377400 | - | Detail |
| C2H8g29695 | 8:15,359,864-15,361,745 | - | C1H8g10166 | CX8g053995 | LOC_Os08g29110 | Os08g0378900 | OsTRXz | Detail |
| C2H8g10295 | 8:15,362,865-15,378,768 | - | C1H8g31869 | CX8g051710 | LOC_Os08g29124 | Os08g0379000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |