| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15275 | 5:20,049,608-20,050,189 | - | C2H5g03586 | CX5g037356 | LOC_Os05g41760 | Os05g0497200 | ERF130, MFS1, OsERF#130, OsERF130, AP2/EREBP#165, AP2/EREBP165 | Detail |
| C1H5g19097 | 5:20,055,399-20,055,647 | - | C2H5g06109 | CX4g034076 | - | - | - | Detail |
| C1H5g27872 | 5:20,055,648-20,056,139 | - | C2H5g13982 | - | - | - | - | Detail |
| C1H5g20790 | 5:20,062,529-20,063,239 | - | C2H5g05481 | CX5g039606 | LOC_Os05g41780 | Os05g0497300 | OsERF74 | Detail |
| C1H5g01822 | 5:20,083,062-20,087,959 | - | C2H5g00564 | CX5g039317 | LOC_Os05g41790 | Os05g0497500 | - | Detail |
| C1H5g17713 | 5:20,090,865-20,096,563 | + | C2H5g16839 | CX5g040928 | LOC_Os05g41795 | Os05g0497600 | OsAIR1, AIR1 | Detail |
| C1H5g13253 | 5:20,098,572-20,100,561 | + | C2H5g11087 | CX5g039298 | LOC_Os05g41800 | Os05g0497675 | - | Detail |
| C1H5g27914 | 5:20,101,213-20,106,582 | - | C2H5g10568 | CX5g040599 | LOC_Os05g41810 | Os05g0497700 | - | Detail |
| C1H5g15467 | 5:20,118,683-20,119,255 | - | C2H5g27281 | CX5g039834 | LOC_Os05g41870 | Os05g0498200 | - | Detail |
| C1H5g00818 | 5:20,121,023-20,132,299 | + | C2H5g03550 | CX5g038090 | LOC_Os05g41880 | Os05g0498300 | OsMSH5 | Detail |
| C1H5g23053 | 5:20,134,248-20,135,100 | + | C2H5g07561 | CX5g041007 | LOC_Os05g41900 | Os05g0498400 | - | Detail |
| C1H5g22087 | 5:20,138,188-20,141,304 | - | C2H5g20540 | CX5g037671 | LOC_Os05g41910 | Os05g0498500 | - | Detail |
| C1H5g16508 | 5:20,149,444-20,152,144 | - | C2H5g08647 | CX5g036819 | LOC_Os05g41930 | Os05g0498700 | OsNRP5 | Detail |
| C1H5g11668 | 5:20,160,724-20,163,347 | - | C2H5g02834 | CX5g038006 | LOC_Os05g41950 | Os05g0498900 | - | Detail |
| C1H5g27146 | 5:20,164,649-20,165,215 | - | C2H5g07577 | CX5g038210 | LOC_Os05g41970 | Os05g0499100 | - | Detail |
| C1H5g01020 | 5:20,169,969-20,171,622 | + | C2H5g10838 | CX5g037732 | LOC_Os05g41990 | Os05g0499300 | - | Detail |
| C1H5g03879 | 5:20,173,678-20,175,368 | + | C2H5g21405 | CX5g037740 | LOC_Os05g42000 | Os05g0499400 | - | Detail |
| C1H5g13308 | 5:20,175,854-20,179,602 | - | C2H5g23263 | CX5g037878 | LOC_Os05g42010 | Os05g0499500 | - | Detail |
| C1H5g01320 | 5:20,181,122-20,182,603 | + | C2H5g04911 | CX5g038550 | LOC_Os05g42020 | Os05g0499600 | - | Detail |
| C1H5g19452 | 5:20,187,033-20,188,487 | + | C2H5g10638 | CX5g038976 | LOC_Os05g42040 | Os05g0499800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18098 | 4:22,366,357-22,367,357 | + | C1H4g27983 | CX4g036341 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| C2H4g25250 | 4:22,371,472-22,373,949 | - | C1H4g02633 | CX4g031725 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| C2H4g17137 | 4:22,383,999-22,387,231 | - | C1H4g03662 | CX4g034141 | LOC_Os04g54890 | Os02g0517900 | - | Detail |
| C2H4g28659 | 4:22,395,708-22,396,055 | + | - | CX4g031509 | LOC_Os04g43740 | Os04g0517900 | - | Detail |
| C2H4g18845 | 4:22,398,118-22,401,716 | - | C1H4g21239 | CX4g032795 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| C2H4g17450 | 4:22,406,282-22,409,267 | - | C1H4g17678 | CX4g031424 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| C2H4g28869 | 4:22,415,229-22,417,846 | - | C1H4g22637 | CX4g031711 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| C2H4g10523 | 4:22,426,478-22,429,294 | - | C1H4g07857 | - | LOC_Os04g43824 | Os04g0518650 | - | Detail |
| C2H4g12982 | 4:22,438,115-22,441,881 | + | C1H4g21094 | CX4g035278 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| C2H4g03913 | 4:22,457,073-22,459,758 | + | C1H4g30028 | CX4g031681 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| C2H4g13261 | 4:22,466,807-22,478,296 | - | C1H4g09015 | CX4g033896 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| C2H4g00328 | 4:22,479,350-22,483,931 | - | C1H4g07978 | CX4g033084 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| C2H4g21426 | 4:22,490,205-22,490,729 | - | - | CX4g032805 | LOC_Os04g43990 | Os04g0520700 | OsS40-13 | Detail |
| C2H4g11598 | 4:22,496,349-22,497,743 | + | C1H4g05728 | CX4g034414 | LOC_Os04g44030 | Os04g0520900 | - | Detail |
| C2H4g13133 | 4:22,504,372-22,506,431 | + | C1H4g29455 | CX4g032514 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| C2H4g21649 | 4:22,507,177-22,507,470 | - | C1H4g20974 | - | - | - | - | Detail |
| C2H4g30421 | 4:22,507,757-22,508,776 | - | C1H4g01962 | - | - | - | - | Detail |
| C2H4g17426 | 4:22,510,893-22,512,892 | + | C1H4g05956 | CX4g034857 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| C2H4g25112 | 4:22,513,844-22,516,546 | + | C1H4g04229 | CX4g032134 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| C2H4g09903 | 4:22,517,122-22,517,592 | + | - | CX4g032134 | LOC_Os04g44100 | Os04g0521700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |