| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15275 | 5:20,049,608-20,050,189 | - | C2H5g03586 | CX5g037356 | LOC_Os05g41760 | Os05g0497200 | ERF130, MFS1, OsERF#130, OsERF130, AP2/EREBP#165, AP2/EREBP165 | Detail |
| C1H5g19097 | 5:20,055,399-20,055,647 | - | C2H5g06109 | CX4g034076 | - | - | - | Detail |
| C1H5g27872 | 5:20,055,648-20,056,139 | - | C2H5g13982 | - | - | - | - | Detail |
| C1H5g20790 | 5:20,062,529-20,063,239 | - | C2H5g05481 | CX5g039606 | LOC_Os05g41780 | Os05g0497300 | OsERF74 | Detail |
| C1H5g01822 | 5:20,083,062-20,087,959 | - | C2H5g00564 | CX5g039317 | LOC_Os05g41790 | Os05g0497500 | - | Detail |
| C1H5g17713 | 5:20,090,865-20,096,563 | + | C2H5g16839 | CX5g040928 | LOC_Os05g41795 | Os05g0497600 | OsAIR1, AIR1 | Detail |
| C1H5g13253 | 5:20,098,572-20,100,561 | + | C2H5g11087 | CX5g039298 | LOC_Os05g41800 | Os05g0497675 | - | Detail |
| C1H5g27914 | 5:20,101,213-20,106,582 | - | C2H5g10568 | CX5g040599 | LOC_Os05g41810 | Os05g0497700 | - | Detail |
| C1H5g15467 | 5:20,118,683-20,119,255 | - | C2H5g27281 | CX5g039834 | LOC_Os05g41870 | Os05g0498200 | - | Detail |
| C1H5g00818 | 5:20,121,023-20,132,299 | + | C2H5g03550 | CX5g038090 | LOC_Os05g41880 | Os05g0498300 | OsMSH5 | Detail |
| C1H5g23053 | 5:20,134,248-20,135,100 | + | C2H5g07561 | CX5g041007 | LOC_Os05g41900 | Os05g0498400 | - | Detail |
| C1H5g22087 | 5:20,138,188-20,141,304 | - | C2H5g20540 | CX5g037671 | LOC_Os05g41910 | Os05g0498500 | - | Detail |
| C1H5g16508 | 5:20,149,444-20,152,144 | - | C2H5g08647 | CX5g036819 | LOC_Os05g41930 | Os05g0498700 | OsNRP5 | Detail |
| C1H5g11668 | 5:20,160,724-20,163,347 | - | C2H5g02834 | CX5g038006 | LOC_Os05g41950 | Os05g0498900 | - | Detail |
| C1H5g27146 | 5:20,164,649-20,165,215 | - | C2H5g07577 | CX5g038210 | LOC_Os05g41970 | Os05g0499100 | - | Detail |
| C1H5g01020 | 5:20,169,969-20,171,622 | + | C2H5g10838 | CX5g037732 | LOC_Os05g41990 | Os05g0499300 | - | Detail |
| C1H5g03879 | 5:20,173,678-20,175,368 | + | C2H5g21405 | CX5g037740 | LOC_Os05g42000 | Os05g0499400 | - | Detail |
| C1H5g13308 | 5:20,175,854-20,179,602 | - | C2H5g23263 | CX5g037878 | LOC_Os05g42010 | Os05g0499500 | - | Detail |
| C1H5g01320 | 5:20,181,122-20,182,603 | + | C2H5g04911 | CX5g038550 | LOC_Os05g42020 | Os05g0499600 | - | Detail |
| C1H5g19452 | 5:20,187,033-20,188,487 | + | C2H5g10638 | CX5g038976 | LOC_Os05g42040 | Os05g0499800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g23030 | 4:12,848,083-12,849,457 | - | C1H4g19496 | - | - | - | - | Detail |
| C2H4g00602 | 4:12,850,259-12,850,605 | - | C1H4g08388 | CX4g036087 | LOC_Os04g25740 | Os04g0314500 | - | Detail |
| C2H4g19204 | 4:12,858,513-12,859,484 | - | - | - | - | - | - | Detail |
| C2H4g15697 | 4:12,895,850-12,897,223 | + | C1H4g03848 | - | - | - | - | Detail |
| C2H4g29155 | 4:12,916,944-12,918,535 | + | C1H4g11483 | CX4g033259 | LOC_Os04g25140 | Os04g0316800 | - | Detail |
| C2H4g06744 | 4:12,919,272-12,920,661 | + | - | - | - | - | - | Detail |
| C2H4g17736 | 4:12,922,511-12,926,374 | + | - | CX4g036636 | LOC_Os08g23280 | - | - | Detail |
| C2H4g17585 | 4:12,938,735-12,939,963 | + | C1H4g23443 | CX4g034186 | LOC_Os04g25140 | Os04g0317300 | - | Detail |
| C2H4g06583 | 4:13,086,602-13,089,303 | + | C1H4g27437 | - | LOC_Os04g25360 | Os04g0319600 | - | Detail |
| C2H4g27440 | 4:13,091,166-13,092,677 | + | C1H4g01135 | CX4g032327 | LOC_Os04g25980 | Os04g0319700 | - | Detail |
| C2H4g14364 | 4:13,102,100-13,103,614 | + | C1H4g27404 | CX4g036582 | LOC_Os04g25380 | Os04g0319800 | - | Detail |
| C2H4g16249 | 4:13,104,369-13,113,257 | - | C1H4g11765 | CX4g034067 | LOC_Os04g25960 | Os04g0326000 | - | Detail |
| C2H4g13198 | 4:13,121,456-13,126,802 | + | C1H4g08601 | CX4g034663 | LOC_Os04g25400 | Os04g0320100 | OsHCAR | Detail |
| C2H4g23070 | 4:13,127,494-13,130,993 | - | C1H4g12613 | CX4g033316 | LOC_Os04g25410 | Os04g0320200 | - | Detail |
| C2H4g15158 | 4:13,156,262-13,157,832 | - | C1H4g07570 | CX4g036503 | LOC_Os04g25440 | Os04g0320700 | - | Detail |
| C2H4g21449 | 4:13,168,002-13,170,110 | + | C1H4g16139 | CX4g034511 | LOC_Os04g25490 | Os04g0320700 | - | Detail |
| C2H4g08941 | 4:13,181,718-13,182,491 | + | C1H4g05580 | CX4g034960 | LOC_Os04g25540 | Os04g0321500 | mtRPL27a, S28 | Detail |
| C2H4g14101 | 4:13,183,982-13,189,739 | + | C1H4g01277 | - | - | - | - | Detail |
| C2H4g20494 | 4:13,189,924-13,194,569 | - | C1H4g13430 | CX4g033520 | LOC_Os04g25560 | Os04g0321700 | - | Detail |
| C2H4g04631 | 4:13,197,873-13,198,361 | - | C1H4g19422 | CX4g035269 | LOC_Os04g25570 | Os04g0609600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |