| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g19870 | 5:19,922,663-19,923,396 | + | C2H5g27070 | - | - | - | - | Detail |
| C1H5g15971 | 5:19,927,586-19,931,654 | + | C2H5g27840 | CX5g037576 | LOC_Os05g41440 | Os05g0494000 | OsC3'H1, CYP98A4 | Detail |
| C1H5g14365 | 5:19,933,152-19,937,141 | + | C2H5g22696 | CX5g040207 | LOC_Os05g41450 | Os05g0494100 | DRAP2, OsDrAp2, OsHAPL1 | Detail |
| C1H5g30644 | 5:19,938,003-19,938,557 | - | C2H5g26776 | CX5g039984 | LOC_Os05g41460 | Os05g0494200 | OC-II, OC-III | Detail |
| C1H5g25577 | 5:19,944,537-19,945,604 | + | C2H5g13599 | CX5g039879 | LOC_Os05g41480 | Os05g0494500 | - | Detail |
| C1H5g22952 | 5:19,948,860-19,949,795 | - | C2H5g19411 | CX5g039595 | LOC_Os05g41490 | Os05g0494600 | - | Detail |
| C1H5g26938 | 5:19,957,705-19,958,226 | + | C2H5g09380 | CX5g037664 | LOC_Os05g41500 | Os05g0494700 | - | Detail |
| C1H5g06464 | 5:19,960,501-19,968,994 | + | C2H5g03995 | CX5g039650 | LOC_Os05g41510 | Os05g0494800 | - | Detail |
| C1H5g10924 | 5:19,969,051-19,969,944 | - | C2H5g23505 | CX5g040632 | LOC_Os05g41520 | Os05g0495000 | - | Detail |
| C1H5g24212 | 5:19,972,974-19,976,637 | + | C2H5g03977 | CX5g040499 | LOC_Os05g41530 | Os05g0495100 | - | Detail |
| C1H5g12882 | 5:19,981,946-19,982,620 | - | C2H5g23523 | CX5g041013 | LOC_Os05g41540 | Os05g0495200 | - | Detail |
| C1H5g06979 | 5:19,995,580-20,001,782 | + | C2H5g25673 | CX5g039272 | LOC_Os05g41580 | Os05g0495600 | - | Detail |
| C1H5g15624 | 5:20,005,107-20,007,677 | + | C2H5g22048 | CX5g038287 | LOC_Os05g41590 | Os05g0495700 | - | Detail |
| C1H5g21401 | 5:20,015,024-20,018,539 | + | C2H5g23221 | CX5g040024 | LOC_Os05g41610 | Os05g0495900 | - | Detail |
| C1H5g08153 | 5:20,020,071-20,020,463 | + | C2H5g16652 | CX5g040938 | LOC_Os05g41620 | Os05g0496000 | - | Detail |
| C1H5g29278 | 5:20,020,984-20,021,886 | - | C2H5g16282 | CX5g038168 | LOC_Os05g41630 | Os05g0496100 | - | Detail |
| C1H5g10706 | 5:20,022,899-20,025,355 | - | C2H5g29840 | CX5g039229 | LOC_Os05g41640 | Os05g0496200 | - | Detail |
| C1H5g02490 | 5:20,027,052-20,028,397 | - | C2H5g26906 | CX5g038553 | LOC_Os05g41660 | Os05g0496400 | OsMC4 | Detail |
| C1H5g27054 | 5:20,028,841-20,031,368 | - | C2H5g01565 | CX5g038025 | LOC_Os05g41670 | Os05g0496500 | OsMC5 | Detail |
| C1H5g24401 | 5:20,038,242-20,047,668 | + | C2H5g01213 | CX5g038896 | LOC_Os05g41750 | Os05g0497150 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10310 | 3:10,894,128-10,896,740 | + | C1H3g27306 | CX3g030007 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| C2H3g17481 | 3:10,896,805-10,900,686 | - | C1H3g15898 | CX3g028069 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| C2H3g22879 | 3:10,904,923-10,906,403 | - | C1H3g21366 | CX3g029311 | LOC_Os11g11390 | Os03g0332500 | - | Detail |
| C2H3g01804 | 3:10,908,596-10,910,611 | - | C1H3g21148 | CX3g027147 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| C2H3g10583 | 3:10,913,454-10,917,924 | - | C1H3g11764 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C2H3g24190 | 3:10,924,413-10,929,402 | + | C1H3g02450 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C2H3g30311 | 3:10,929,734-10,935,090 | - | C1H3g13994 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C2H3g26938 | 3:10,935,271-10,945,526 | + | C1H3g12459 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C2H3g19269 | 3:10,946,787-10,949,471 | + | C1H3g29664 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C2H3g24047 | 3:10,953,705-10,958,206 | + | C1H3g30788 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C2H3g24886 | 3:10,958,751-10,959,254 | + | C1H3g06087 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C2H3g01911 | 3:10,962,059-10,966,029 | - | C1H3g12764 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C2H3g06072 | 3:10,971,787-10,975,855 | + | C1H3g24732 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C2H3g19486 | 3:10,977,888-10,981,311 | + | C1H3g12242 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C2H3g01471 | 3:10,981,968-10,982,447 | - | C1H3g12872 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C2H3g23114 | 3:10,988,613-10,995,631 | + | C1H3g04089 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C2H3g29675 | 3:10,995,715-11,000,869 | - | C1H3g19863 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C2H3g22866 | 3:11,003,512-11,004,783 | + | C1H3g05344 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C2H3g03886 | 3:11,009,746-11,011,541 | + | C1H3g04080 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C2H3g08004 | 3:11,015,360-11,015,605 | + | C1H3g16339 | CX3g030092 | - | Os07g0676800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |