| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g19870 | 5:19,922,663-19,923,396 | + | C2H5g27070 | - | - | - | - | Detail |
| C1H5g15971 | 5:19,927,586-19,931,654 | + | C2H5g27840 | CX5g037576 | LOC_Os05g41440 | Os05g0494000 | OsC3'H1, CYP98A4 | Detail |
| C1H5g14365 | 5:19,933,152-19,937,141 | + | C2H5g22696 | CX5g040207 | LOC_Os05g41450 | Os05g0494100 | DRAP2, OsDrAp2, OsHAPL1 | Detail |
| C1H5g30644 | 5:19,938,003-19,938,557 | - | C2H5g26776 | CX5g039984 | LOC_Os05g41460 | Os05g0494200 | OC-II, OC-III | Detail |
| C1H5g25577 | 5:19,944,537-19,945,604 | + | C2H5g13599 | CX5g039879 | LOC_Os05g41480 | Os05g0494500 | - | Detail |
| C1H5g22952 | 5:19,948,860-19,949,795 | - | C2H5g19411 | CX5g039595 | LOC_Os05g41490 | Os05g0494600 | - | Detail |
| C1H5g26938 | 5:19,957,705-19,958,226 | + | C2H5g09380 | CX5g037664 | LOC_Os05g41500 | Os05g0494700 | - | Detail |
| C1H5g06464 | 5:19,960,501-19,968,994 | + | C2H5g03995 | CX5g039650 | LOC_Os05g41510 | Os05g0494800 | - | Detail |
| C1H5g10924 | 5:19,969,051-19,969,944 | - | C2H5g23505 | CX5g040632 | LOC_Os05g41520 | Os05g0495000 | - | Detail |
| C1H5g24212 | 5:19,972,974-19,976,637 | + | C2H5g03977 | CX5g040499 | LOC_Os05g41530 | Os05g0495100 | - | Detail |
| C1H5g12882 | 5:19,981,946-19,982,620 | - | C2H5g23523 | CX5g041013 | LOC_Os05g41540 | Os05g0495200 | - | Detail |
| C1H5g06979 | 5:19,995,580-20,001,782 | + | C2H5g25673 | CX5g039272 | LOC_Os05g41580 | Os05g0495600 | - | Detail |
| C1H5g15624 | 5:20,005,107-20,007,677 | + | C2H5g22048 | CX5g038287 | LOC_Os05g41590 | Os05g0495700 | - | Detail |
| C1H5g21401 | 5:20,015,024-20,018,539 | + | C2H5g23221 | CX5g040024 | LOC_Os05g41610 | Os05g0495900 | - | Detail |
| C1H5g08153 | 5:20,020,071-20,020,463 | + | C2H5g16652 | CX5g040938 | LOC_Os05g41620 | Os05g0496000 | - | Detail |
| C1H5g29278 | 5:20,020,984-20,021,886 | - | C2H5g16282 | CX5g038168 | LOC_Os05g41630 | Os05g0496100 | - | Detail |
| C1H5g10706 | 5:20,022,899-20,025,355 | - | C2H5g29840 | CX5g039229 | LOC_Os05g41640 | Os05g0496200 | - | Detail |
| C1H5g02490 | 5:20,027,052-20,028,397 | - | C2H5g26906 | CX5g038553 | LOC_Os05g41660 | Os05g0496400 | OsMC4 | Detail |
| C1H5g27054 | 5:20,028,841-20,031,368 | - | C2H5g01565 | CX5g038025 | LOC_Os05g41670 | Os05g0496500 | OsMC5 | Detail |
| C1H5g24401 | 5:20,038,242-20,047,668 | + | C2H5g01213 | CX5g038896 | LOC_Os05g41750 | Os05g0497150 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g21742 | 12:7,953,738-7,957,203 | - | C1H12g23481 | CX12g016666 | LOC_Os12g16250 | Os12g0263600 | - | Detail |
| C2H12g09837 | 12:7,965,840-7,966,673 | - | C1H12g19638 | CX12g016756 | - | - | - | Detail |
| C2H12g28081 | 12:7,968,856-7,969,194 | + | - | CX12g018545 | LOC_Os02g35120 | Os06g0629362 | - | Detail |
| C2H12g05917 | 12:7,982,822-7,985,891 | - | C1H12g31185 | CX12g016907 | LOC_Os12g16520 | Os12g0614851 | - | Detail |
| C2H12g24177 | 12:7,993,537-7,994,355 | - | C1H12g05455 | CX12g018590 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g24213 | 12:7,994,387-7,995,226 | - | C1H12g12669 | CX12g016989 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C2H12g15577 | 12:8,037,335-8,039,673 | + | C1H12g30337 | CX12g015656 | - | - | - | Detail |
| C2H12g13855 | 12:8,065,465-8,065,944 | - | - | CX12g015139 | - | - | - | Detail |
| C2H12g13804 | 12:8,066,709-8,067,195 | + | C1H12g12690 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C2H12g25263 | 12:8,070,111-8,081,634 | + | C1H12g04576 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C2H12g29205 | 12:8,085,928-8,086,371 | + | C1H12g26358 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C2H12g22341 | 12:8,096,868-8,097,109 | + | C1H12g24303 | CX12g017950 | LOC_Os12g16370 | - | - | Detail |
| C2H12g01086 | 12:8,101,650-8,104,551 | + | C1H12g20439 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C2H12g04535 | 12:8,117,029-8,118,986 | - | C1H12g24834 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C2H12g04709 | 12:8,195,949-8,200,053 | - | C1H12g27646 | CX12g016443 | LOC_Os12g17070 | Os12g0270100 | - | Detail |
| C2H12g27718 | 12:8,205,451-8,207,208 | + | C1H12g23758 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C2H12g03089 | 12:8,213,300-8,218,084 | - | C1H12g00865 | CX12g016852 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g11132 | 12:8,238,815-8,241,615 | - | C1H12g07805 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C2H12g14706 | 12:8,247,114-8,250,863 | - | C1H12g17449 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| C2H12g04129 | 12:8,266,886-8,267,263 | - | - | CX12g018058 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |