| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03177 | 5:19,805,380-19,808,214 | - | C2H5g06467 | CX5g037157 | LOC_Os05g41180 | Os05g0490800 | - | Detail |
| C1H5g04917 | 5:19,811,428-19,812,143 | - | C2H5g15902 | - | LOC_Os05g41190 | Os05g0490900 | - | Detail |
| C1H5g01262 | 5:19,813,082-19,813,619 | - | C2H5g03482 | CX5g040781 | LOC_Os05g41200 | Os05g0491000 | OsCML9 | Detail |
| C1H5g17633 | 5:19,814,039-19,817,259 | - | C2H5g27006 | CX5g040781 | LOC_Os05g41210 | Os05g0491100 | - | Detail |
| C1H5g22455 | 5:19,820,729-19,823,314 | - | C2H5g10562 | CX5g040781 | LOC_Os05g41220 | Os05g0491200 | - | Detail |
| C1H5g13777 | 5:19,832,060-19,833,405 | - | C2H5g17918 | CX5g040218 | LOC_Os05g41230 | Os05g0491400 | - | Detail |
| C1H5g28707 | 5:19,834,006-19,834,245 | - | C2H5g25567 | CX5g036882 | LOC_Os05g41230 | Os05g0491400 | - | Detail |
| C1H5g10854 | 5:19,837,264-19,841,394 | - | C2H5g09584 | CX5g037471 | LOC_Os05g41240 | Os05g0491500 | - | Detail |
| C1H5g20980 | 5:19,855,847-19,856,413 | - | C2H5g22106 | CX5g038007 | LOC_Os05g41250 | Os05g0491700 | - | Detail |
| C1H5g30902 | 5:19,859,767-19,862,073 | - | C2H5g21965 | CX5g040451 | LOC_Os05g41270 | Os05g0491900 | OsCPK14 | Detail |
| C1H5g29542 | 5:19,864,294-19,866,211 | + | C2H5g13147 | CX5g040832 | LOC_Os05g41280 | Os05g0492000 | - | Detail |
| C1H5g27219 | 5:19,869,910-19,873,284 | + | C2H5g02635 | CX5g040156 | LOC_Os05g41290 | Os05g0492200 | - | Detail |
| C1H5g10780 | 5:19,876,198-19,879,563 | + | C2H5g19061 | CX5g038782 | LOC_Os05g41310 | Os05g0492600 | - | Detail |
| C1H5g24473 | 5:19,876,318-19,877,773 | - | C2H5g12811 | - | - | Os05g0492500 | - | Detail |
| C1H5g26798 | 5:19,882,995-19,885,573 | - | C2H5g05724 | CX5g041141 | LOC_Os05g40730 | - | - | Detail |
| C1H5g03494 | 5:19,888,776-19,892,953 | + | C2H5g17631 | CX5g041000 | LOC_Os05g41370 | Os05g0493100 | - | Detail |
| C1H5g10631 | 5:19,898,661-19,901,589 | + | C2H5g00500 | CX5g037871 | LOC_Os05g41390 | Os05g0493500 | - | Detail |
| C1H5g02448 | 5:19,905,171-19,906,636 | - | C2H5g02711 | CX5g037681 | LOC_Os05g41400 | Os05g0493600 | - | Detail |
| C1H5g24117 | 5:19,916,392-19,918,321 | + | C2H5g25483 | CX5g039492 | LOC_Os05g41420 | Os05g0493800 | - | Detail |
| C1H5g23051 | 5:19,922,596-19,924,450 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19159 | 3:4,560,847-4,564,352 | + | C1H3g27623 | CX3g030601 | LOC_Os03g10190 | Os03g0198400 | - | Detail |
| C2H3g09921 | 3:4,570,322-4,572,644 | + | C1H3g02850 | CX3g031306 | LOC_Os03g10200 | Os03g0198500 | - | Detail |
| C2H3g24222 | 3:4,574,335-4,575,869 | - | C1H3g04729 | CX3g030929 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| C2H3g01513 | 3:4,585,572-4,585,963 | + | C1H3g24941 | - | - | - | - | Detail |
| C2H3g16295 | 3:4,593,765-4,595,784 | - | C1H3g23090 | CX3g026889 | LOC_Os03g10220 | - | - | Detail |
| C2H3g19804 | 3:4,596,596-4,599,606 | - | C1H3g13438 | CX3g026154 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| C2H3g09522 | 3:4,599,798-4,604,196 | + | C1H3g16749 | CX3g028745 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| C2H3g01585 | 3:4,609,414-4,610,589 | + | C1H3g12272 | CX3g029096 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| C2H3g23420 | 3:4,621,273-4,622,353 | - | C1H3g00274 | CX3g031305 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| C2H3g26891 | 3:4,639,608-4,640,847 | + | C1H3g07008 | CX3g025392 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| C2H3g01636 | 3:4,654,885-4,656,386 | + | C1H3g12286 | CX3g029912 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| C2H3g23926 | 3:4,662,597-4,663,344 | + | C1H3g29696 | CX3g028962 | - | - | - | Detail |
| C2H3g07176 | 3:4,664,495-4,666,798 | + | C1H3g13020 | CX3g025427 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| C2H3g17766 | 3:4,666,929-4,671,061 | - | C1H3g29298 | CX3g027963 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| C2H3g08890 | 3:4,673,665-4,676,594 | - | C1H3g01933 | CX3g025362 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| C2H3g09465 | 3:4,677,826-4,680,128 | - | C1H3g30301 | CX3g031231 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| C2H3g19650 | 3:4,683,420-4,685,696 | + | C1H3g28372 | CX3g028366 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| C2H3g21201 | 3:4,686,111-4,690,220 | - | C1H3g07769 | CX3g026809 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| C2H3g08749 | 3:4,690,383-4,692,431 | + | C1H3g03267 | - | LOC_Os03g10410 | Os03g0201200 | - | Detail |
| C2H3g27980 | 3:4,692,955-4,695,336 | + | C1H3g26783 | CX3g027641 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |