| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03150 | 5:19,704,652-19,705,368 | + | C2H5g28435 | CX5g038773 | LOC_Os05g40950 | Os05g0488500 | - | Detail |
| C1H5g10864 | 5:19,706,559-19,708,748 | - | C2H5g15684 | CX5g037471 | LOC_Os05g40960 | Os05g0488600 | - | Detail |
| C1H5g29301 | 5:19,715,415-19,716,386 | - | C2H5g10762 | CX5g036864 | LOC_Os05g40980 | Os05g0488800 | OsSIRP1, SIRP1 | Detail |
| C1H5g30435 | 5:19,718,925-19,721,518 | + | C2H5g22368 | CX5g038499 | LOC_Os05g40990 | Os05g0488900 | - | Detail |
| C1H5g00494 | 5:19,724,120-19,729,605 | + | C2H5g07104 | CX5g038470 | LOC_Os05g41000 | Os05g0489000 | - | Detail |
| C1H5g12778 | 5:19,731,257-19,733,469 | + | C2H5g00595 | CX5g040097 | LOC_Os05g41010 | Os05g0489100 | - | Detail |
| C1H5g22216 | 5:19,735,943-19,737,161 | - | C2H5g23469 | - | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C1H5g05615 | 5:19,737,619-19,738,035 | - | C2H5g15924 | CX5g037795 | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C1H5g29364 | 5:19,741,494-19,744,765 | - | C2H5g27372 | CX5g037436 | LOC_Os05g41060 | Os05g0489600 | - | Detail |
| C1H5g11382 | 5:19,747,970-19,750,342 | + | C2H5g09500 | CX5g037252 | LOC_Os05g41070 | Os05g0489700 | HBF1, OsbZIP42 | Detail |
| C1H5g00326 | 5:19,752,002-19,752,268 | + | C2H5g01943 | CX5g039059 | - | Os05g0489750 | - | Detail |
| C1H5g30374 | 5:19,753,024-19,755,252 | - | C2H5g05322 | CX5g039132 | LOC_Os05g41080 | Os05g0489800 | OsCENH3 | Detail |
| C1H5g17926 | 5:19,756,621-19,760,399 | - | C2H5g07453 | CX5g038078 | LOC_Os05g41090 | Os05g0489900 | DMI3, OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK | Detail |
| C1H5g27285 | 5:19,761,302-19,763,281 | - | C2H5g20839 | CX5g037785 | LOC_Os05g41100 | Os05g0490000 | - | Detail |
| C1H5g14042 | 5:19,763,521-19,765,356 | + | C2H5g02383 | CX5g039362 | LOC_Os05g41110 | Os05g0490100 | - | Detail |
| C1H5g00258 | 5:19,766,408-19,772,462 | + | C2H5g16191 | CX5g038500 | LOC_Os05g41120 | Os05g0490200 | - | Detail |
| C1H5g17707 | 5:19,775,358-19,776,413 | - | C2H5g27761 | CX5g037621 | LOC_Os05g41130 | Os05g0490300 | - | Detail |
| C1H5g17579 | 5:19,784,564-19,791,022 | - | C2H5g07017 | CX5g039490 | LOC_Os05g41150 | Os05g0490400 | - | Detail |
| C1H5g31086 | 5:19,792,040-19,794,897 | - | C2H5g07145 | CX5g038921 | LOC_Os05g41166 | Os05g0490600 | CSA2 | Detail |
| C1H5g16631 | 5:19,798,346-19,804,273 | - | C2H5g25171 | CX5g037848 | LOC_Os05g41172 | Os05g0490700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g10172 | 12:19,200,857-19,204,980 | + | C1H12g01189 | CX12g015184 | LOC_Os12g37580 | Os12g0562700 | - | Detail |
| C2H12g04554 | 12:19,208,147-19,212,347 | + | C1H12g29271 | CX12g018698 | LOC_Os12g37590 | Os12g0562900 | - | Detail |
| C2H12g28745 | 12:19,219,233-19,221,945 | + | C1H12g07191 | CX12g018166 | LOC_Os12g37600 | Os12g0563000 | - | Detail |
| C2H12g22646 | 12:19,224,442-19,226,906 | - | C1H12g26460 | CX12g016722 | LOC_Os12g37610 | Os12g0563200 | TCD11 | Detail |
| C2H12g16734 | 12:19,228,165-19,231,317 | + | C1H12g16775 | CX12g015930 | LOC_Os12g37630 | Os12g0563400 | - | Detail |
| C2H12g16167 | 12:19,231,843-19,237,219 | + | C1H12g19468 | CX12g017340 | LOC_Os12g37640 | Os12g0563500 | - | Detail |
| C2H12g28870 | 12:19,241,144-19,241,758 | + | C1H12g18856 | CX12g016515 | LOC_Os12g37650 | Os12g0563600 | - | Detail |
| C2H12g06156 | 12:19,244,583-19,248,050 | - | C1H12g14071 | CX12g015374 | LOC_Os12g37660 | Os12g0563700 | - | Detail |
| C2H12g24685 | 12:19,255,944-19,257,812 | - | C1H12g07476 | CX12g017390 | LOC_Os12g37690 | Os12g0564100 | Os2R_MYB97 | Detail |
| C2H12g09945 | 12:19,270,957-19,273,588 | + | C1H12g22539 | CX12g015794 | LOC_Os12g37710 | Os12g0564400 | - | Detail |
| C2H12g27883 | 12:19,273,848-19,282,916 | - | C1H12g20500 | CX12g016927 | LOC_Os12g37720 | Os12g0564600 | - | Detail |
| C2H12g03379 | 12:19,284,956-19,288,045 | - | C1H12g04508 | CX12g016233 | LOC_Os12g37740 | Os12g0564800 | Pijx | Detail |
| C2H12g21743 | 12:19,288,394-19,294,971 | - | C1H12g03020 | CX12g017177 | LOC_Os12g37740 | Os12g0564800 | Pijx | Detail |
| C2H12g07047 | 12:19,296,423-19,296,750 | - | - | - | - | - | - | Detail |
| C2H12g03104 | 12:19,296,876-19,297,061 | - | C1H12g20951 | - | - | - | - | Detail |
| C2H12g05639 | 12:19,297,314-19,298,359 | + | C1H12g08134 | CX12g017162 | LOC_Os12g37750 | Os12g0565000 | - | Detail |
| C2H12g05838 | 12:19,298,394-19,299,734 | + | C1H12g19073 | CX12g017162 | LOC_Os12g37750 | Os12g0589400 | HSA1a, HSA1a-j | Detail |
| C2H12g00801 | 12:19,312,775-19,316,104 | + | C1H12g23639 | CX12g017607 | LOC_Os12g37770 | Os12g0565200 | - | Detail |
| C2H12g17933 | 12:19,316,614-19,320,900 | - | C1H12g05537 | CX12g016058 | LOC_Os12g37780 | Os12g0565300 | - | Detail |
| C2H12g20757 | 12:19,354,323-19,359,099 | + | C1H12g19479 | CX12g016748 | LOC_Os12g37840 | Os12g0566000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |