| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g04267 | 5:19,553,846-19,554,538 | - | C2H5g19500 | CX5g039418 | LOC_Os05g40630 | Os05g0484800 | - | Detail |
| C1H5g28621 | 5:19,565,835-19,568,562 | - | C2H5g29609 | CX5g036684 | LOC_Os05g40650 | Os05g0485000 | - | Detail |
| C1H5g20371 | 5:19,574,093-19,577,617 | + | C2H5g13383 | CX5g040127 | LOC_Os05g40700 | Os05g0485300 | - | Detail |
| C1H5g01527 | 5:19,580,211-19,581,725 | + | C2H5g03405 | CX5g040290 | LOC_Os05g40710 | Os05g0485400 | - | Detail |
| C1H5g12798 | 5:19,582,842-19,587,335 | - | C2H5g25060 | CX5g037319 | LOC_Os05g40720 | Os05g0485500 | - | Detail |
| C1H5g13412 | 5:19,587,885-19,588,886 | + | C2H5g23682 | CX5g037058 | LOC_Os05g40730 | - | - | Detail |
| C1H5g09644 | 5:19,589,016-19,589,314 | + | C2H5g23682 | CX5g037058 | LOC_Os05g40730 | - | - | Detail |
| C1H5g20204 | 5:19,594,800-19,595,102 | - | C2H5g20005 | CX5g039326 | LOC_Os05g40740 | Os01g0816700 | - | Detail |
| C1H5g29442 | 5:19,595,585-19,596,997 | - | C2H5g20005 | CX5g039326 | LOC_Os05g40740 | Os05g0485800 | - | Detail |
| C1H5g17484 | 5:19,597,838-19,598,916 | - | C2H5g09762 | CX5g040801 | LOC_Os05g40770 | Os05g0486100 | - | Detail |
| C1H5g11289 | 5:19,602,491-19,602,881 | - | C2H5g16762 | CX5g040199 | - | - | - | Detail |
| C1H5g06885 | 5:19,603,025-19,604,129 | + | - | - | LOC_Os09g35620 | - | - | Detail |
| C1H5g06940 | 5:19,606,972-19,617,917 | - | C2H5g05566 | CX5g040354 | LOC_Os05g40780 | Os05g0486200 | - | Detail |
| C1H5g23574 | 5:19,625,081-19,627,548 | + | C2H5g24759 | CX5g040282 | LOC_Os05g40790 | Os05g0486300 | - | Detail |
| C1H5g00175 | 5:19,653,731-19,654,710 | - | C2H5g20972 | - | - | - | - | Detail |
| C1H5g05720 | 5:19,658,774-19,661,220 | - | C2H5g21082 | CX5g037737 | LOC_Os05g40800 | Os05g0109400 | - | Detail |
| C1H5g03176 | 5:19,662,796-19,668,983 | - | C2H5g03168 | CX5g040679 | LOC_Os05g40810 | Os05g0486600 | - | Detail |
| C1H5g07809 | 5:19,671,268-19,672,901 | - | C2H5g22924 | CX5g040595 | LOC_Os05g40820 | Os05g0486700 | - | Detail |
| C1H5g30282 | 5:19,690,800-19,691,668 | + | C2H5g01005 | CX5g039413 | LOC_Os05g40850 | Os05g0487100 | OsCG5 | Detail |
| C1H5g29314 | 5:19,696,600-19,697,193 | + | C2H5g08697 | CX5g039526 | LOC_Os05g40890 | Os05g0487300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g16716 | 4:29,196,574-29,202,704 | + | C1H4g13098 | CX4g034339 | LOC_Os04g56720 | Os04g0662800 | - | Detail |
| C2H4g14267 | 4:29,203,420-29,205,381 | - | C1H4g29894 | CX4g033445 | LOC_Os04g56730 | Os04g0662900 | - | Detail |
| C2H4g26679 | 4:29,222,202-29,228,139 | + | C1H4g08308 | CX4g032535 | LOC_Os04g56740 | Os04g0663100 | - | Detail |
| C2H4g19453 | 4:29,231,603-29,237,104 | - | C1H4g00285 | CX4g033028 | LOC_Os04g56750 | Os04g0663200 | - | Detail |
| C2H4g17808 | 4:29,238,059-29,238,391 | - | C1H5g05278 | CX4g031937 | LOC_Os04g56760 | Os04g0663300 | OsPHF5A1 | Detail |
| C2H4g23478 | 4:29,239,673-29,239,927 | + | C1H4g10605 | CX4g034501 | - | - | - | Detail |
| C2H4g29870 | 4:29,239,978-29,243,354 | + | C1H4g18316 | CX4g032009 | LOC_Os04g56770 | Os04g0663500 | - | Detail |
| C2H4g27682 | 4:29,244,197-29,245,269 | - | C1H4g08413 | CX4g035961 | LOC_Os04g56780 | Os04g0663600 | WOX1, Os WUS, WUS, OsWOX1, OsWUS, TAB1, TAB1/WUS, MOC3, MOC3/OsWUS | Detail |
| C2H4g25028 | 4:29,253,233-29,260,212 | - | C1H4g06808 | CX4g034853 | LOC_Os04g56790 | Os04g0663700 | - | Detail |
| C2H4g24912 | 4:29,262,184-29,262,843 | + | - | CX4g036037 | LOC_Os04g56820 | - | - | Detail |
| C2H4g18884 | 4:29,265,411-29,265,767 | + | - | CX4g035877 | - | - | - | Detail |
| C2H4g26604 | 4:29,266,394-29,267,548 | - | - | - | - | - | - | Detail |
| C2H4g20102 | 4:29,268,657-29,274,641 | - | C1H4g18422 | CX4g033249 | LOC_Os04g56850 | Os04g0664400 | OsARF11, OsMP | Detail |
| C2H4g00899 | 4:29,296,008-29,297,348 | + | C1H4g27904 | CX4g034957 | LOC_Os04g56900 | Os04g0664500 | OsAHT1 | Detail |
| C2H4g19479 | 4:29,299,350-29,300,699 | - | C1H4g27904 | CX4g035701 | LOC_Os04g56910 | Os04g0664600 | OsAHT2 | Detail |
| C2H4g29529 | 4:29,307,857-29,308,045 | - | C1H4g28826 | CX4g036377 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| C2H4g12473 | 4:29,308,394-29,310,189 | - | C1H4g28826 | CX4g036377 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| C2H4g26922 | 4:29,310,977-29,313,340 | - | C1H4g05011 | CX4g036377 | LOC_Os04g56930 | Os04g0664900 | - | Detail |
| C2H4g09681 | 4:29,314,042-29,316,157 | + | C1H4g08334 | CX4g034395 | - | Os04g0665000 | - | Detail |
| C2H4g19734 | 4:29,317,030-29,318,991 | - | C1H4g02808 | CX4g035345 | LOC_Os04g56950 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |