| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g04267 | 5:19,553,846-19,554,538 | - | C2H5g19500 | CX5g039418 | LOC_Os05g40630 | Os05g0484800 | - | Detail |
| C1H5g28621 | 5:19,565,835-19,568,562 | - | C2H5g29609 | CX5g036684 | LOC_Os05g40650 | Os05g0485000 | - | Detail |
| C1H5g20371 | 5:19,574,093-19,577,617 | + | C2H5g13383 | CX5g040127 | LOC_Os05g40700 | Os05g0485300 | - | Detail |
| C1H5g01527 | 5:19,580,211-19,581,725 | + | C2H5g03405 | CX5g040290 | LOC_Os05g40710 | Os05g0485400 | - | Detail |
| C1H5g12798 | 5:19,582,842-19,587,335 | - | C2H5g25060 | CX5g037319 | LOC_Os05g40720 | Os05g0485500 | - | Detail |
| C1H5g13412 | 5:19,587,885-19,588,886 | + | C2H5g23682 | CX5g037058 | LOC_Os05g40730 | - | - | Detail |
| C1H5g09644 | 5:19,589,016-19,589,314 | + | C2H5g23682 | CX5g037058 | LOC_Os05g40730 | - | - | Detail |
| C1H5g20204 | 5:19,594,800-19,595,102 | - | C2H5g20005 | CX5g039326 | LOC_Os05g40740 | Os01g0816700 | - | Detail |
| C1H5g29442 | 5:19,595,585-19,596,997 | - | C2H5g20005 | CX5g039326 | LOC_Os05g40740 | Os05g0485800 | - | Detail |
| C1H5g17484 | 5:19,597,838-19,598,916 | - | C2H5g09762 | CX5g040801 | LOC_Os05g40770 | Os05g0486100 | - | Detail |
| C1H5g11289 | 5:19,602,491-19,602,881 | - | C2H5g16762 | CX5g040199 | - | - | - | Detail |
| C1H5g06885 | 5:19,603,025-19,604,129 | + | - | - | LOC_Os09g35620 | - | - | Detail |
| C1H5g06940 | 5:19,606,972-19,617,917 | - | C2H5g05566 | CX5g040354 | LOC_Os05g40780 | Os05g0486200 | - | Detail |
| C1H5g23574 | 5:19,625,081-19,627,548 | + | C2H5g24759 | CX5g040282 | LOC_Os05g40790 | Os05g0486300 | - | Detail |
| C1H5g00175 | 5:19,653,731-19,654,710 | - | C2H5g20972 | - | - | - | - | Detail |
| C1H5g05720 | 5:19,658,774-19,661,220 | - | C2H5g21082 | CX5g037737 | LOC_Os05g40800 | Os05g0109400 | - | Detail |
| C1H5g03176 | 5:19,662,796-19,668,983 | - | C2H5g03168 | CX5g040679 | LOC_Os05g40810 | Os05g0486600 | - | Detail |
| C1H5g07809 | 5:19,671,268-19,672,901 | - | C2H5g22924 | CX5g040595 | LOC_Os05g40820 | Os05g0486700 | - | Detail |
| C1H5g30282 | 5:19,690,800-19,691,668 | + | C2H5g01005 | CX5g039413 | LOC_Os05g40850 | Os05g0487100 | OsCG5 | Detail |
| C1H5g29314 | 5:19,696,600-19,697,193 | + | C2H5g08697 | CX5g039526 | LOC_Os05g40890 | Os05g0487300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g18428 | 3:10,113,603-10,119,053 | + | C1H3g25351 | CX3g028132 | LOC_Os03g20180 | Os03g0317000 | - | Detail |
| C2H3g29051 | 3:10,120,425-10,123,556 | + | C1H3g17147 | CX3g030095 | LOC_Os03g20190 | Os03g0317100 | - | Detail |
| C2H3g17176 | 3:10,127,690-10,129,036 | + | C1H3g11404 | CX3g028796 | LOC_Os03g20210 | Os03g0317300 | - | Detail |
| C2H3g05954 | 3:10,129,665-10,130,966 | + | C1H3g16001 | CX3g026260 | LOC_Os03g20230 | Os03g0318400 | - | Detail |
| C2H3g08312 | 3:10,148,285-10,149,496 | + | C1H3g07890 | CX3g025491 | LOC_Os03g20230 | Os03g0317900 | - | Detail |
| C2H3g29183 | 3:10,156,535-10,157,829 | + | C1H3g20479 | CX3g028957 | LOC_Os03g20290 | Os03g0318400 | - | Detail |
| C2H3g10315 | 3:10,159,326-10,165,265 | - | C1H3g31254 | CX3g024974 | LOC_Os03g20300 | Os03g0318500 | - | Detail |
| C2H3g15586 | 3:10,165,700-10,170,792 | - | C1H3g27797 | CX3g025701 | LOC_Os03g20310 | Os03g0318600 | OsTGA3 | Detail |
| C2H3g06773 | 3:10,189,059-10,189,592 | + | C1H3g25597 | CX3g031095 | LOC_Os03g20330 | Os03g0319000 | - | Detail |
| C2H3g23539 | 3:10,198,181-10,202,944 | + | C1H3g29099 | CX3g030494 | LOC_Os03g20340 | Os03g0319100 | - | Detail |
| C2H3g28901 | 3:10,210,141-10,211,572 | + | C1H3g19829 | CX3g028434 | LOC_Os03g20350 | Os03g0319200 | - | Detail |
| C2H3g27412 | 3:10,215,103-10,216,385 | + | C1H3g23043 | CX3g031077 | LOC_Os03g20370 | Os03g0319300 | OsCam1-1, OsCaM1-1, OsCaM1 | Detail |
| C2H3g25279 | 3:10,218,816-10,224,305 | - | C1H3g21490 | CX3g026317 | LOC_Os03g20380 | Os03g0319400 | - | Detail |
| C2H3g09371 | 3:10,236,975-10,240,513 | - | C1H3g25971 | CX3g025212 | LOC_Os03g20410 | Os03g0320000 | OsSIP2 | Detail |
| C2H3g22340 | 3:10,246,385-10,254,520 | - | C1H3g08252 | CX3g029293 | LOC_Os03g20420 | Os03g0320100 | - | Detail |
| C2H3g01972 | 3:10,258,993-10,260,337 | + | C1H3g09342 | CX3g029244 | LOC_Os03g20430 | Os03g0320400 | - | Detail |
| C2H3g13875 | 3:10,265,951-10,266,607 | - | C1H3g07396 | CX3g027813 | LOC_Os03g20440 | Os03g0320600 | - | Detail |
| C2H3g23140 | 3:10,282,338-10,287,474 | + | C1H3g21035 | CX3g030303 | LOC_Os03g20450 | Os03g0320800 | - | Detail |
| C2H3g14660 | 3:10,290,528-10,293,295 | + | C1H3g22135 | CX3g027683 | LOC_Os03g20460 | Os03g0320900 | V2, pt/mtGK | Detail |
| C2H3g12919 | 3:10,294,659-10,297,133 | + | C1H3g27273 | CX3g026494 | LOC_Os03g20470 | Os03g0321000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |