| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02618 | 5:19,209,893-19,212,054 | - | C2H5g18071 | CX1g001859 | LOC_Os05g39960 | Os05g0477300 | - | Detail |
| C1H5g30837 | 5:19,212,462-19,214,127 | - | C2H5g02002 | CX5g039095 | - | Os05g0204600 | OsBBX14, OsDBB3b | Detail |
| C1H5g02202 | 5:19,214,514-19,218,768 | - | C2H5g14247 | CX5g038009 | LOC_Os05g39980 | Os05g0477500 | - | Detail |
| C1H5g30215 | 5:19,220,885-19,222,240 | - | C2H5g20824 | CX5g040535 | LOC_Os05g39990 | Os05g0477600 | OsEXPA4, OsEXP4 | Detail |
| C1H5g10767 | 5:19,229,853-19,230,374 | + | C2H5g15346 | CX5g040284 | LOC_Os05g40010 | Os05g0477900 | - | Detail |
| C1H5g07203 | 5:19,231,508-19,232,077 | + | C2H5g20467 | CX5g041113 | LOC_Os05g40020 | Os05g0478000 | - | Detail |
| C1H5g10010 | 5:19,236,202-19,240,443 | + | C2H5g12806 | CX5g040411 | LOC_Os05g40040 | Os05g0478200 | - | Detail |
| C1H5g00196 | 5:19,244,069-19,247,664 | + | C2H5g01765 | CX5g038363 | LOC_Os05g40050 | Os05g0478300 | - | Detail |
| C1H5g12837 | 5:19,256,829-19,259,414 | - | C2H5g08495 | CX5g037318 | LOC_Os05g40070 | Os05g0478700 | - | Detail |
| C1H5g11113 | 5:19,267,520-19,268,612 | - | C2H5g25461 | CX5g037363 | LOC_Os05g40080 | Os05g0478800 | OsWRKY54 | Detail |
| C1H5g26849 | 5:19,274,692-19,275,736 | - | C2H5g10570 | CX5g037363 | LOC_Os05g40080 | Os05g0478800 | OsWRKY54 | Detail |
| C1H5g24241 | 5:19,289,281-19,289,553 | - | C2H5g08801 | CX5g039436 | LOC_Os05g40150 | Os05g0479700 | - | Detail |
| C1H5g06063 | 5:19,291,970-19,294,501 | - | C2H5g08801 | CX5g039436 | LOC_Os05g40150 | Os05g0479700 | - | Detail |
| C1H5g29758 | 5:19,296,689-19,299,292 | + | C2H5g20369 | - | LOC_Os05g40160 | Os05g0479800 | - | Detail |
| C1H5g04289 | 5:19,302,735-19,303,849 | - | C2H5g10573 | CX5g040657 | LOC_Os05g40170 | Os05g0479900 | - | Detail |
| C1H5g15872 | 5:19,305,798-19,308,870 | + | C2H5g25386 | CX5g038549 | LOC_Os05g40180 | Os05g0480000 | - | Detail |
| C1H5g28899 | 5:19,309,029-19,309,840 | - | C2H5g29302 | CX5g040025 | LOC_Os05g40190 | Os05g0480200 | - | Detail |
| C1H5g23691 | 5:19,311,773-19,317,010 | - | C2H5g01124 | CX5g039013 | LOC_Os05g40200 | Os05g0480400 | - | Detail |
| C1H5g19892 | 5:19,328,890-19,333,156 | - | C2H5g07858 | CX5g037523 | LOC_Os05g40220 | Os05g0480600 | - | Detail |
| C1H5g06303 | 5:19,338,827-19,340,315 | + | C2H5g15641 | CX5g037415 | LOC_Os05g40230 | Os05g0480700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13527 | 1:35,592,228-35,593,819 | - | C1H1g17623 | CX1g000619 | LOC_Os01g69240 | Os01g0921500 | - | Detail |
| C2H1g04376 | 1:35,594,292-35,597,650 | + | C1H1g22149 | CX1g000315 | LOC_Os01g69250 | Os01g0921600 | - | Detail |
| C2H1g29960 | 1:35,610,814-35,612,304 | - | C1H1g03696 | CX1g005205 | LOC_Os01g69270 | Os01g0921800 | WCR1 | Detail |
| C2H1g09433 | 1:35,666,759-35,671,474 | + | C1H1g03830 | CX1g004693 | LOC_Os01g69830 | Os01g0922600 | OsSPL2 | Detail |
| C2H1g26166 | 1:35,687,859-35,688,056 | + | C1H1g12266 | CX1g007029 | LOC_Os01g69850 | Os01g0922800 | MADS51, OsMADS51, OsMADS65, MADS65 | Detail |
| C2H1g12395 | 1:35,705,899-35,708,743 | + | C1H1g07999 | - | LOC_Os01g69850 | Os01g0922800 | MADS51, OsMADS51, OsMADS65, MADS65 | Detail |
| C2H1g01640 | 1:35,721,360-35,725,310 | + | C1H1g11016 | CX1g004462 | LOC_Os01g69900 | Os01g0923300 | - | Detail |
| C2H1g04390 | 1:35,728,528-35,734,512 | + | C1H1g13300 | CX1g004735 | LOC_Os01g69910 | Os01g0923600 | - | Detail |
| C2H1g25723 | 1:35,735,075-35,740,903 | - | C1H1g01597 | CX1g001516 | LOC_Os01g69920 | Os01g0923700 | HK3, OHK2, HK, OsHK3, Ohk, Crl2, Ohk2, OsHK3b | Detail |
| C2H1g05728 | 1:35,776,915-35,779,849 | - | C1H1g02952 | CX1g005730 | LOC_Os01g69940 | Os01g0923900 | - | Detail |
| C2H1g01923 | 1:35,787,046-35,788,517 | + | C1H1g29264 | CX1g005835 | LOC_Os01g69950 | Os01g0924000 | - | Detail |
| C2H1g07961 | 1:35,796,289-35,800,606 | - | C1H1g10772 | CX1g006541 | LOC_Os01g69970 | Os01g0924300 | - | Detail |
| C2H1g18855 | 1:35,816,815-35,823,491 | - | C1H1g29827 | CX1g005525 | LOC_Os01g69990 | Os01g0924600 | MHZ9 | Detail |
| C2H1g25318 | 1:35,829,628-35,831,721 | - | C1H1g07165 | CX1g000477 | LOC_Os01g70010 | Os01g0924800 | - | Detail |
| C2H1g12545 | 1:35,834,800-35,840,852 | + | C1H1g27548 | CX1g006526 | LOC_Os01g70020 | Os01g0924900 | - | Detail |
| C2H1g09893 | 1:35,842,124-35,844,153 | + | C1H1g13467 | CX1g005950 | LOC_Os01g63480 | Os01g0924933 | DPW2 | Detail |
| C2H1g29042 | 1:35,861,209-35,867,478 | - | C1H1g14986 | CX1g000475 | LOC_Os01g70060 | Os01g0925000 | - | Detail |
| C2H1g12590 | 1:35,873,631-35,874,811 | - | C1H1g14986 | CX1g000475 | LOC_Os01g70060 | Os01g0925000 | - | Detail |
| C2H1g27652 | 1:35,877,572-35,882,385 | - | C1H1g20180 | CX1g005348 | LOC_Os01g70080 | Os01g0925100 | - | Detail |
| C2H1g21256 | 1:35,884,785-35,887,277 | + | C1H1g19559 | CX1g006900 | LOC_Os01g70090 | Os01g0925200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |