| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g16953 | 5:19,021,841-19,023,820 | - | C2H5g12671 | CX5g039479 | LOC_Os05g39610 | Os05g0473500 | - | Detail |
| C1H5g28837 | 5:19,027,867-19,035,527 | - | C2H5g00871 | CX5g038166 | LOC_Os05g39650 | Os05g0473900 | - | Detail |
| C1H5g23543 | 5:19,038,550-19,039,212 | + | C2H5g03115 | CX5g037616 | LOC_Os05g39670 | Os05g0474400 | OsPRA1 | Detail |
| C1H5g05941 | 5:19,042,550-19,052,021 | + | C2H5g16559 | CX5g038614 | LOC_Os05g39680 | Os05g0474500 | - | Detail |
| C1H5g02428 | 5:19,052,395-19,055,089 | + | C2H5g05801 | CX5g040410 | LOC_Os05g39690 | Os05g0474600 | - | Detail |
| C1H5g20154 | 5:19,063,373-19,063,903 | + | C2H5g17238 | CX5g040522 | LOC_Os05g39710 | Os05g0474700 | - | Detail |
| C1H5g08082 | 5:19,067,216-19,069,661 | - | C2H5g04432 | CX5g037583 | LOC_Os05g39720 | Os05g0474800 | OsWRKY70 | Detail |
| C1H5g19137 | 5:19,074,027-19,075,691 | - | C2H1g08505 | CX5g037743 | LOC_Os05g39730 | Os05g0474900 | - | Detail |
| C1H5g23731 | 5:19,075,750-19,076,654 | - | - | - | - | - | - | Detail |
| C1H5g14545 | 5:19,106,463-19,110,676 | + | C2H5g15236 | CX5g038464 | LOC_Os05g39760 | Os05g0475300 | - | Detail |
| C1H5g05842 | 5:19,110,717-19,114,593 | - | C2H5g29956 | CX5g040082 | LOC_Os05g39770 | Os05g0475400 | Osh36, OsAMTR1, AMTR1 | Detail |
| C1H5g24087 | 5:19,126,169-19,128,336 | + | C2H5g14259 | CX5g040426 | LOC_Os05g39800 | Os05g0475700 | - | Detail |
| C1H5g02615 | 5:19,151,418-19,152,065 | - | C2H5g01656 | CX5g039468 | LOC_Os05g39830 | Os05g0476000 | - | Detail |
| C1H5g14499 | 5:19,158,540-19,161,394 | + | C2H5g15885 | CX5g037045 | LOC_Os05g39840 | Os05g0476100 | - | Detail |
| C1H5g13949 | 5:19,161,740-19,166,780 | + | C2H5g26475 | CX5g039438 | LOC_Os05g39850 | Os05g0476200 | - | Detail |
| C1H5g07404 | 5:19,172,433-19,174,597 | - | C2H5g16830 | CX5g040845 | LOC_Os05g39870 | Os05g0476350 | - | Detail |
| C1H5g26372 | 5:19,177,225-19,178,584 | - | C2H5g28858 | CX1g003469 | LOC_Os05g39880 | Os05g0476400 | OsEPFL8 | Detail |
| C1H5g24797 | 5:19,192,410-19,194,458 | + | C2H5g16023 | CX5g038260 | LOC_Os05g39930 | Os05g0476700 | OsPUB2 | Detail |
| C1H5g11519 | 5:19,203,382-19,204,758 | + | C2H5g25197 | CX5g039005 | LOC_Os05g39950 | Os05g0477200 | OsOFP22 | Detail |
| C1H5g18496 | 5:19,203,888-19,204,796 | - | - | - | - | Os05g0477100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g20602 | 1:33,825,406-33,829,243 | - | C1H1g06784 | CX1g002810 | LOC_Os01g65940 | Os01g0881966 | - | Detail |
| C2H1g14820 | 1:33,829,342-33,829,683 | - | - | - | - | - | - | Detail |
| C2H1g18577 | 1:33,831,291-33,831,649 | + | C1H1g26227 | CX1g002714 | LOC_Os01g65950 | Os01g0882100 | - | Detail |
| C2H1g05908 | 1:33,835,359-33,841,512 | + | C1H1g03465 | CX1g004350 | LOC_Os01g65986 | Os01g0882300 | - | Detail |
| C2H1g09811 | 1:33,841,734-33,842,687 | - | C1H1g00623 | CX1g004839 | LOC_Os01g66000 | Os01g0882500 | - | Detail |
| C2H1g26075 | 1:33,844,719-33,847,776 | - | C1H1g12565 | CX1g001863 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| C2H1g11503 | 1:33,854,099-33,856,181 | - | C1H1g27902 | CX1g000214 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| C2H1g08965 | 1:33,858,404-33,865,168 | + | C1H1g29165 | CX1g004776 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| C2H1g18953 | 1:33,898,433-33,901,519 | + | C1H1g04579 | CX1g004921 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| C2H1g12762 | 1:33,902,414-33,907,948 | - | C1H1g11499 | CX1g004480 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| C2H1g26289 | 1:33,916,327-33,918,090 | - | C1H1g00819 | CX1g006945 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| C2H1g15992 | 1:33,927,325-33,931,236 | + | C1H1g22008 | CX1g000207 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| C2H1g16552 | 1:33,931,364-33,942,765 | - | C1H1g14405 | CX1g001201 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| C2H1g27234 | 1:33,944,159-33,947,234 | - | C1H1g17014 | CX1g001119 | - | - | - | Detail |
| C2H1g20664 | 1:33,951,528-33,953,587 | - | C1H1g08290 | CX1g001844 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| C2H1g19237 | 1:33,955,455-33,957,011 | + | C1H1g07105 | CX1g005283 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| C2H1g27259 | 1:33,957,249-33,960,272 | - | C1H1g15937 | CX1g006373 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| C2H1g17695 | 1:33,961,162-33,963,507 | + | C1H1g27873 | CX1g005687 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| C2H1g03917 | 1:33,970,832-33,976,494 | - | C1H1g19782 | CX1g002733 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| C2H1g15479 | 1:33,981,535-33,987,010 | - | C1H1g04510 | CX1g006568 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |