| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01899 | 5:18,875,099-18,877,942 | + | C2H5g18865 | CX5g036944 | LOC_Os05g39310 | Os05g0469600 | Ospdc1 | Detail |
| C1H5g17771 | 5:18,881,373-18,881,975 | + | C2H5g07982 | CX5g040493 | LOC_Os05g39320 | Os05g0469800 | RRJ2, PDC1 | Detail |
| C1H5g02466 | 5:18,881,994-18,883,702 | + | C2H5g08481 | CX5g040493 | LOC_Os05g39320 | Os05g0469800 | RRJ2, PDC1 | Detail |
| C1H5g04421 | 5:18,884,566-18,887,625 | - | C2H5g06883 | CX5g040121 | LOC_Os05g39350 | Os05g0470000 | - | Detail |
| C1H5g12895 | 5:18,902,653-18,904,332 | + | C2H5g07736 | CX5g040095 | LOC_Os05g39380 | Os05g0470700 | - | Detail |
| C1H5g00959 | 5:18,906,484-18,910,205 | - | C2H5g12492 | CX5g040306 | LOC_Os05g39390 | Os05g0470800 | - | Detail |
| C1H5g29961 | 5:18,911,820-18,913,268 | + | C2H5g12700 | CX5g037125 | LOC_Os05g39400 | Os05g0470900 | - | Detail |
| C1H5g06052 | 5:18,913,490-18,917,156 | - | C2H5g26893 | CX5g036882 | LOC_Os05g39410 | Os05g0471000 | - | Detail |
| C1H5g06723 | 5:18,926,606-18,928,072 | - | - | - | - | - | - | Detail |
| C1H5g19650 | 5:18,928,515-18,929,420 | - | C2H5g07606 | - | - | - | - | Detail |
| C1H5g25585 | 5:18,930,484-18,931,254 | - | C2H5g10143 | CX5g037860 | LOC_Os05g39450 | Os05g0471350 | - | Detail |
| C1H5g09380 | 5:18,952,236-18,952,952 | + | C2H5g21299 | CX5g039840 | LOC_Os05g39500 | Os05g0472000 | OsG1L8 | Detail |
| C1H5g12229 | 5:18,966,051-18,970,708 | - | C2H5g25272 | CX5g036972 | LOC_Os05g39520 | Os05g0472200 | - | Detail |
| C1H5g23504 | 5:18,971,619-18,974,005 | - | C2H5g07324 | CX5g038206 | LOC_Os05g39530 | Os05g0472300 | - | Detail |
| C1H5g14755 | 5:18,982,528-18,986,510 | + | C2H5g02174 | CX5g040617 | LOC_Os05g39540 | Os05g0472400 | OsZIP9 | Detail |
| C1H5g09021 | 5:18,990,753-18,992,906 | + | C2H5g12063 | CX5g038639 | LOC_Os05g39560 | Os05g0472700 | OsZIP5 | Detail |
| C1H5g31249 | 5:19,004,727-19,005,392 | - | C2H5g11951 | CX5g039388 | LOC_Os05g39580 | Os05g0473000 | - | Detail |
| C1H5g27001 | 5:19,011,796-19,013,509 | + | - | CX5g036978 | - | - | - | Detail |
| C1H5g23864 | 5:19,014,778-19,016,340 | + | C2H5g19718 | CX5g039698 | LOC_Os05g39590 | Os05g0473300 | - | Detail |
| C1H5g20386 | 5:19,017,849-19,020,703 | + | C2H5g12883 | CX5g039234 | LOC_Os05g39600 | Os05g0473401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14587 | 4:25,910,918-25,914,065 | + | C1H4g08529 | CX4g031568 | LOC_Os04g50920 | Os04g0597300 | OsWRKY37 | Detail |
| C2H4g10163 | 4:25,920,589-25,923,939 | + | C1H4g06047 | CX4g032482 | LOC_Os04g50930 | Os04g0597400 | OsNPF7.6 | Detail |
| C2H4g28892 | 4:25,929,260-25,931,882 | + | C1H4g02149 | CX4g035098 | LOC_Os04g50940 | Os04g0597600 | OsNPF7.4a, OsNPF7.4 | Detail |
| C2H4g23843 | 4:25,934,133-25,937,592 | + | C1H4g05496 | CX4g035098 | LOC_Os04g50950 | Os04g0597800 | OsPTR6, OsNPF7.3 | Detail |
| C2H4g13606 | 4:25,939,410-25,942,239 | + | C1H4g28441 | CX4g032040 | LOC_Os04g50960 | Os04g0597900 | - | Detail |
| C2H4g26740 | 4:25,943,074-25,945,753 | - | C1H4g06669 | CX4g036258 | LOC_Os04g50970 | Os04g0598000 | - | Detail |
| C2H4g23664 | 4:25,951,331-25,951,831 | + | - | CX4g032903 | LOC_Os04g50990 | Os04g0598200 | - | Detail |
| C2H4g22999 | 4:25,953,653-25,956,392 | - | C1H4g18615 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C2H4g16283 | 4:25,966,213-25,968,916 | + | C1H4g12663 | CX4g032270 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C2H4g19837 | 4:25,979,243-25,984,049 | + | C1H4g19687 | CX4g033918 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C2H4g26708 | 4:25,984,843-25,987,348 | - | C1H4g27427 | CX4g033732 | LOC_Os04g51040 | Os04g0598900 | - | Detail |
| C2H4g23112 | 4:25,990,395-25,992,751 | - | C1H4g27024 | CX4g034393 | LOC_Os04g51050 | Os04g0599000 | - | Detail |
| C2H4g27441 | 4:25,994,811-26,000,739 | - | C1H4g02875 | CX4g033004 | LOC_Os04g51060 | Os02g0700000 | - | Detail |
| C2H4g22306 | 4:26,004,241-26,006,549 | - | C1H4g14973 | CX4g034139 | LOC_Os04g51070 | Os04g0599300 | EAT1, OsbHLH141, EAT1/DTD1, bHLH141, DTD1, DTD | Detail |
| C2H4g03863 | 4:26,011,461-26,017,698 | + | C1H4g26976 | CX4g034652 | LOC_Os04g51080 | Os04g0599400 | - | Detail |
| C2H4g03311 | 4:26,020,975-26,035,049 | + | C1H4g19631 | CX4g033723 | LOC_Os04g51090 | Os04g0599650 | - | Detail |
| C2H4g27597 | 4:26,035,983-26,038,810 | + | C1H4g29659 | CX4g034671 | LOC_Os04g51100 | Os04g0599700 | - | Detail |
| C2H4g20047 | 4:26,039,513-26,042,411 | + | C1H4g20555 | CX4g033831 | LOC_Os04g51110 | Os04g0599800 | CDC20.1 | Detail |
| C2H4g05473 | 4:26,042,841-26,047,868 | + | C1H4g01630 | CX4g035744 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| C2H4g10442 | 4:26,050,574-26,052,329 | + | C1H4g04836 | CX4g035030 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |