| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g21036 | 5:18,753,877-18,754,188 | + | C2H5g09767 | CX5g037421 | LOC_Os05g39050 | Os05g0462700 | - | Detail |
| C1H5g31118 | 5:18,755,498-18,756,916 | - | C2H5g13581 | CX5g039804 | LOC_Os05g39060 | Os05g0126800 | - | Detail |
| C1H5g05117 | 5:18,760,995-18,763,153 | + | C2H5g06731 | CX5g039967 | LOC_Os05g39070 | Os05g0466800 | - | Detail |
| C1H5g14576 | 5:18,761,892-18,768,804 | - | C2H5g29590 | CX5g037557 | LOC_Os05g39080 | Os05g0466900 | - | Detail |
| C1H5g19503 | 5:18,771,064-18,776,379 | - | C2H5g06761 | CX5g037206 | LOC_Os05g39090 | Os05g0467000 | OsCPK16 | Detail |
| C1H5g25663 | 5:18,782,960-18,786,025 | + | C2H5g13821 | CX5g040208 | LOC_Os05g39110 | Os05g0467300 | - | Detail |
| C1H5g14944 | 5:18,787,285-18,789,345 | + | C2H5g22884 | CX5g039101 | LOC_Os05g39120 | Os05g0467400 | - | Detail |
| C1H5g21928 | 5:18,792,687-18,797,751 | - | C2H5g01596 | CX5g040026 | LOC_Os05g39140 | Os05g0467600 | - | Detail |
| C1H5g14390 | 5:18,798,442-18,800,278 | + | C2H5g19533 | CX5g039101 | LOC_Os05g39150 | Os05g0467700 | - | Detail |
| C1H5g15611 | 5:18,802,285-18,808,168 | + | C2H5g29716 | CX5g039101 | LOC_Os05g39160 | Os05g0468100 | - | Detail |
| C1H5g01223 | 5:18,813,376-18,815,554 | + | C2H5g16633 | CX5g039101 | LOC_Os05g39180 | Os05g0468100 | - | Detail |
| C1H5g19061 | 5:18,817,450-18,819,532 | + | C2H5g08374 | CX5g039101 | LOC_Os05g39190 | Os05g0468200 | - | Detail |
| C1H5g08249 | 5:18,821,554-18,822,455 | + | - | - | - | - | - | Detail |
| C1H5g20940 | 5:18,827,614-18,828,417 | + | C2H5g21881 | CX5g039447 | LOC_Os05g39210 | Os05g0468400 | - | Detail |
| C1H5g10537 | 5:18,828,506-18,829,943 | + | C2H5g21881 | CX5g039101 | LOC_Os05g39210 | Os05g0468400 | - | Detail |
| C1H5g21975 | 5:18,831,139-18,832,749 | - | C2H5g02966 | CX5g036720 | LOC_Os05g39220 | Os05g0468500 | - | Detail |
| C1H5g17365 | 5:18,835,038-18,843,561 | + | C2H5g13151 | CX5g040929 | LOC_Os05g39230 | Os05g0468600 | - | Detail |
| C1H5g05340 | 5:18,847,125-18,851,282 | + | C2H5g02700 | CX5g037578 | LOC_Os05g39240 | Os05g0468700 | OsAMT2;1 | Detail |
| C1H5g00101 | 5:18,854,458-18,855,056 | - | C2H5g27707 | CX5g040210 | LOC_Os05g39250 | Os05g0468800 | - | Detail |
| C1H5g30545 | 5:18,860,418-18,861,011 | + | C2H5g13753 | CX5g037066 | LOC_Os05g39260 | Os05g0468900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g28847 | 9:14,495,660-14,501,828 | + | C1H9g14790 | CX9g056670 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| C2H9g06834 | 9:14,527,167-14,527,978 | + | C1H9g30078 | - | LOC_Os09g28520 | Os09g0459200 | SG1, OsSG1 | Detail |
| C2H9g17751 | 9:14,547,384-14,551,872 | - | C1H9g01784 | CX9g056105 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| C2H9g06752 | 9:14,555,807-14,567,696 | + | C1H9g28087 | CX9g057640 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| C2H9g25937 | 9:14,568,988-14,570,284 | - | C1H9g15128 | CX9g055374 | - | Os09g0459900 | - | Detail |
| C2H9g01353 | 9:14,575,563-14,576,426 | + | C1H9g20930 | CX9g056394 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| C2H9g17816 | 9:14,579,147-14,588,717 | + | C1H9g17836 | CX9g055971 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| C2H9g21518 | 9:14,592,660-14,593,598 | + | C1H9g11334 | CX9g055140 | LOC_Os09g28640 | Os09g0460500 | - | Detail |
| C2H9g29988 | 9:14,596,327-14,597,068 | - | - | - | - | - | - | Detail |
| C2H9g26252 | 9:14,598,004-14,598,942 | + | C1H9g08722 | CX9g055140 | LOC_Os09g28650 | Os09g0460700 | - | Detail |
| C2H9g05249 | 9:14,628,687-14,629,661 | - | C1H9g31584 | CX9g055140 | LOC_Os09g28750 | Os09g0462200 | - | Detail |
| C2H9g03017 | 9:14,629,957-14,630,593 | - | C1H9g31193 | - | - | Os09g0462301 | - | Detail |
| C2H9g27701 | 9:14,634,127-14,636,646 | + | C1H9g18452 | CX9g057311 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| C2H9g19629 | 9:14,637,145-14,639,254 | + | C1H9g29610 | CX9g056435 | LOC_Os09g28780 | - | - | Detail |
| C2H9g05705 | 9:14,650,276-14,654,133 | + | C1H9g28013 | CX9g055048 | LOC_Os09g28810 | Os09g0462700 | - | Detail |
| C2H9g21321 | 9:14,655,361-14,655,770 | + | C1H9g15723 | - | - | Os09g0462850 | - | Detail |
| C2H9g19364 | 9:14,657,776-14,660,369 | - | C1H9g15089 | CX9g057216 | LOC_Os09g28830 | Os09g0462875 | - | Detail |
| C2H9g06754 | 9:14,662,217-14,665,042 | - | C1H9g24460 | CX9g056317 | LOC_Os09g28840 | Os09g0463100 | - | Detail |
| C2H9g23768 | 9:14,665,134-14,667,009 | - | C1H9g24460 | CX9g056317 | LOC_Os09g28840 | - | - | Detail |
| C2H9g26932 | 9:14,677,261-14,679,579 | - | C1H9g16758 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |