| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g16481 | 5:18,611,537-18,619,827 | - | C2H5g23688 | CX5g040696 | LOC_Os05g38730 | Os05g0462600 | - | Detail |
| C1H5g01037 | 5:18,622,921-18,623,232 | - | C2H5g09767 | CX5g037421 | LOC_Os05g39050 | Os05g0462700 | - | Detail |
| C1H5g10476 | 5:18,626,978-18,627,268 | - | C2H5g30583 | CX5g040276 | LOC_Os05g38760 | Os05g0462900 | - | Detail |
| C1H5g21054 | 5:18,629,239-18,631,085 | - | C2H5g09732 | CX5g040728 | LOC_Os05g38770 | Os05g0463000 | - | Detail |
| C1H5g22054 | 5:18,637,478-18,639,855 | - | C2H5g02393 | CX5g041103 | LOC_Os05g38790 | Os05g0463300 | - | Detail |
| C1H5g20773 | 5:18,640,575-18,642,729 | + | C2H5g25319 | CX5g038806 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| C1H5g12108 | 5:18,645,302-18,650,615 | + | C2H5g01133 | CX5g039882 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| C1H5g15206 | 5:18,652,322-18,654,936 | - | C2H5g16713 | CX5g040078 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |
| C1H5g26692 | 5:18,657,382-18,663,699 | - | C2H5g05069 | CX5g038352 | LOC_Os05g38830 | Os05g0463900 | - | Detail |
| C1H5g04043 | 5:18,667,859-18,672,129 | + | C2H5g10683 | CX5g038856 | LOC_Os05g38850 | Os05g0464100 | - | Detail |
| C1H5g03107 | 5:18,677,950-18,678,293 | - | C2H5g06217 | - | - | - | - | Detail |
| C1H5g03378 | 5:18,678,680-18,678,931 | - | C2H5g23544 | - | LOC_Os05g38860 | Os05g0464200 | - | Detail |
| C1H5g03501 | 5:18,683,783-18,690,116 | - | C2H5g00642 | CX5g040041 | LOC_Os05g38930 | Os05g0464300 | - | Detail |
| C1H5g22014 | 5:18,690,613-18,691,151 | - | - | - | - | - | - | Detail |
| C1H5g26266 | 5:18,701,358-18,701,600 | + | C2H5g07866 | CX5g037441 | LOC_Os05g38940 | Os05g0465000 | - | Detail |
| C1H5g29457 | 5:18,707,752-18,715,461 | - | C2H5g20572 | CX5g037912 | LOC_Os05g38950 | Os05g0465100 | - | Detail |
| C1H5g08488 | 5:18,726,667-18,727,444 | - | C2H5g24578 | CX5g039928 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| C1H5g21670 | 5:18,732,643-18,736,941 | + | C2H5g18626 | CX5g037984 | LOC_Os05g38980 | Os05g0465800 | - | Detail |
| C1H5g02280 | 5:18,743,614-18,744,776 | - | C2H5g30441 | CX5g037393 | LOC_Os05g38990 | Os05g0466100 | - | Detail |
| C1H5g22492 | 5:18,748,091-18,750,817 | - | C2H5g26967 | CX5g037000 | LOC_Os05g39000 | Os05g0466200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16650 | 3:31,462,462-31,467,174 | + | C1H3g00836 | CX3g029390 | LOC_Os03g60710 | Os03g0821900 | - | Detail |
| C2H3g05197 | 3:31,468,597-31,469,205 | - | C1H3g22161 | CX3g028890 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| C2H3g28970 | 3:31,470,319-31,470,807 | - | C1H3g30466 | CX3g028890 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| C2H3g26732 | 3:31,487,173-31,488,805 | - | C1H3g30684 | CX3g029250 | LOC_Os03g60740 | Os03g0822200 | - | Detail |
| C2H3g00930 | 3:31,489,652-31,491,555 | + | C1H3g07533 | CX3g030322 | LOC_Os03g60750 | Os03g0822300 | - | Detail |
| C2H3g29253 | 3:31,497,433-31,500,472 | + | C1H3g08406 | CX3g026461 | LOC_Os03g60780 | Os03g0822700 | - | Detail |
| C2H3g29318 | 3:31,500,742-31,502,311 | + | C1H3g13457 | CX3g026368 | LOC_Os03g60790 | Os03g0822800 | - | Detail |
| C2H3g15491 | 3:31,502,862-31,506,876 | + | C1H3g01506 | CX3g025072 | LOC_Os03g60800 | Os03g0822900 | - | Detail |
| C2H3g22473 | 3:31,514,830-31,519,572 | - | C1H3g06740 | CX3g027087 | LOC_Os03g60820 | Os03g0823100 | OsXTPH1 | Detail |
| C2H3g15918 | 3:31,523,675-31,524,169 | - | C1H3g24263 | CX3g030305 | LOC_Os03g60840 | Os03g0823400 | - | Detail |
| C2H3g26506 | 3:31,532,309-31,534,951 | - | C1H3g29645 | CX3g026712 | LOC_Os03g60850 | Os03g0823500 | - | Detail |
| C2H3g00093 | 3:31,555,109-31,557,705 | - | C1H3g11164 | CX3g026664 | LOC_Os03g60870 | Os03g0823700 | - | Detail |
| C2H3g02263 | 3:31,559,835-31,563,536 | - | C1H3g23866 | CX3g027221 | LOC_Os03g60880 | Os03g0823800 | - | Detail |
| C2H3g21507 | 3:31,565,794-31,567,761 | - | C1H3g01074 | CX3g030885 | LOC_Os03g60890 | Os03g0436300 | - | Detail |
| C2H3g11643 | 3:31,571,751-31,576,157 | - | C1H3g20395 | CX3g028969 | LOC_Os03g60910 | Os03g0824100 | OspTAC2 | Detail |
| C2H3g24839 | 3:31,576,475-31,578,305 | + | C1H3g15763 | CX3g029964 | LOC_Os03g60920 | Os03g0824200 | - | Detail |
| C2H3g29813 | 3:31,579,358-31,587,038 | + | C1H3g22993 | CX3g026240 | LOC_Os03g60930 | Os03g0824300 | - | Detail |
| C2H3g08790 | 3:31,587,275-31,589,732 | + | C1H3g30240 | CX3g029491 | LOC_Os03g60939 | Os03g0824400 | - | Detail |
| C2H3g23783 | 3:31,590,359-31,591,694 | - | C1H3g23681 | - | LOC_Os03g60950 | Os03g0824500 | - | Detail |
| C2H3g29419 | 3:31,593,720-31,595,221 | + | C1H3g14797 | CX3g026521 | LOC_Os03g60960 | Os03g0824600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |