| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06999 | 5:18,491,080-18,494,310 | - | C2H5g16384 | CX5g037601 | LOC_Os05g38530 | Os05g0460000 | - | Detail |
| C1H5g19906 | 5:18,500,778-18,504,665 | + | C2H5g11460 | CX5g039299 | LOC_Os05g38550 | Os05g0460200 | - | Detail |
| C1H5g22852 | 5:18,509,240-18,509,671 | + | C2H5g26633 | CX5g037542 | LOC_Os05g38560 | Os05g0460475 | - | Detail |
| C1H5g25738 | 5:18,509,693-18,513,093 | - | C2H5g11086 | CX5g041122 | LOC_Os05g38570 | Os05g0460600 | - | Detail |
| C1H5g25326 | 5:18,514,393-18,516,413 | - | C2H5g25868 | CX5g037940 | LOC_Os05g38580 | Os05g0460700 | - | Detail |
| C1H5g26281 | 5:18,517,350-18,520,093 | - | C2H5g10587 | CX5g038780 | LOC_Os05g38590 | Os05g0460800 | - | Detail |
| C1H5g08079 | 5:18,522,030-18,522,557 | - | C2H5g12287 | CX5g038116 | LOC_Os05g38600 | Os05g0460900 | - | Detail |
| C1H5g15994 | 5:18,525,053-18,527,577 | - | C2H5g28199 | CX5g039642 | LOC_Os05g38610 | Os05g0461000 | - | Detail |
| C1H5g24060 | 5:18,528,791-18,529,437 | - | C2H5g19612 | CX5g039642 | - | - | - | Detail |
| C1H5g20771 | 5:18,531,287-18,531,961 | + | C2H5g00940 | CX5g040414 | LOC_Os05g38620 | Os05g0461200 | - | Detail |
| C1H5g01830 | 5:18,532,232-18,535,470 | - | C2H5g14913 | CX5g037842 | LOC_Os05g38630 | Os05g0461300 | - | Detail |
| C1H5g11008 | 5:18,538,144-18,541,312 | - | C2H5g14035 | CX5g038934 | LOC_Os05g38640 | Os05g0461400 | - | Detail |
| C1H5g30185 | 5:18,544,811-18,545,265 | + | C2H10g00951 | - | - | - | - | Detail |
| C1H5g08074 | 5:18,552,397-18,552,983 | + | C2H10g19702 | - | LOC_Os05g38650 | - | - | Detail |
| C1H5g05333 | 5:18,558,304-18,558,594 | + | C2H5g30394 | CX5g039712 | LOC_Os05g38660 | Os05g0461600 | - | Detail |
| C1H5g23888 | 5:18,570,419-18,571,128 | - | C2H5g00554 | CX5g037526 | LOC_Os05g38680 | Os05g0462000 | - | Detail |
| C1H5g10148 | 5:18,586,377-18,587,534 | - | C2H5g15789 | CX5g037861 | LOC_Os05g38690 | Os05g0462200 | - | Detail |
| C1H5g28074 | 5:18,593,830-18,601,241 | - | C2H5g10261 | CX5g038414 | LOC_Os05g38710 | Os05g0462301 | - | Detail |
| C1H5g21212 | 5:18,603,779-18,604,474 | - | - | - | - | - | - | Detail |
| C1H5g08937 | 5:18,606,922-18,608,280 | + | C2H5g13178 | CX5g037480 | LOC_Os05g38720 | Os05g0462500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12947 | 2:24,233,161-24,234,705 | + | C1H2g17222 | CX2g024545 | LOC_Os02g43150 | Os02g0645600 | - | Detail |
| C2H2g06445 | 2:24,233,462-24,234,668 | - | - | - | - | - | - | Detail |
| C2H2g19622 | 2:24,259,273-24,260,767 | + | C1H2g19085 | CX2g024814 | LOC_Os02g43170 | Os02g0646200 | - | Detail |
| C2H2g11300 | 2:24,263,567-24,265,648 | + | C1H2g22786 | CX2g024271 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| C2H2g09061 | 2:24,266,639-24,273,222 | - | C1H2g07582 | CX2g020293 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| C2H2g19522 | 2:24,279,488-24,279,739 | + | - | CX1g001923 | - | - | - | Detail |
| C2H2g08863 | 2:24,284,183-24,286,281 | + | - | - | - | - | - | Detail |
| C2H2g25954 | 2:24,286,941-24,288,260 | - | C1H2g22254 | CX2g019582 | LOC_Os02g43250 | Os02g0647300 | - | Detail |
| C2H2g12985 | 2:24,301,822-24,307,280 | + | C1H2g05654 | CX2g024426 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| C2H2g29445 | 2:24,313,328-24,314,531 | - | C1H2g13691 | CX2g021973 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| C2H2g03827 | 2:24,330,368-24,333,423 | - | C1H2g15207 | CX2g020713 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| C2H2g24370 | 2:24,363,625-24,364,119 | - | - | - | - | - | - | Detail |
| C2H2g11895 | 2:24,372,313-24,373,186 | + | C1H2g25916 | CX2g019169 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| C2H2g11536 | 2:24,376,090-24,380,365 | - | C1H2g29202 | CX2g021953 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| C2H2g22971 | 2:24,381,650-24,382,018 | + | - | CX2g020014 | - | - | - | Detail |
| C2H2g04607 | 2:24,383,987-24,390,208 | + | C1H2g22654 | CX2g021451 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| C2H2g04813 | 2:24,391,339-24,392,027 | - | C1H2g29127 | CX2g024526 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| C2H2g23002 | 2:24,396,962-24,400,823 | - | C1H2g17207 | CX2g022915 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| C2H2g12264 | 2:24,406,147-24,409,852 | - | C1H2g09379 | CX2g019779 | LOC_Os02g43410 | Os02g0650300 | - | Detail |
| C2H2g21909 | 2:24,420,946-24,421,182 | + | - | CX2g022293 | LOC_Os02g43420 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |