| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g19303 | 5:18,359,505-18,359,861 | + | C2H5g10696 | CX5g040829 | - | Os05g0457000 | - | Detail |
| C1H5g06161 | 5:18,360,360-18,362,014 | - | C2H5g10559 | CX5g037372 | LOC_Os05g38290 | Os05g0457200 | OsPP2C49 | Detail |
| C1H5g13421 | 5:18,364,878-18,365,289 | - | - | - | - | - | - | Detail |
| C1H5g31777 | 5:18,372,899-18,374,431 | + | C2H5g09348 | CX5g038384 | LOC_Os05g38320 | Os05g0457600 | - | Detail |
| C1H5g25102 | 5:18,376,005-18,380,217 | - | C2H5g18834 | CX5g038584 | LOC_Os05g38330 | Os05g0457700 | - | Detail |
| C1H5g06264 | 5:18,386,955-18,389,995 | + | C2H5g25191 | CX5g040952 | LOC_Os05g38350 | Os05g0457800 | - | Detail |
| C1H5g14362 | 5:18,395,064-18,397,937 | + | C2H5g15667 | CX5g039661 | LOC_Os05g38360 | Os05g0458000 | - | Detail |
| C1H5g29915 | 5:18,399,049-18,401,464 | - | C2H5g00805 | CX5g041089 | LOC_Os05g38370 | Os05g0458100 | - | Detail |
| C1H5g09153 | 5:18,405,627-18,405,890 | - | C2H5g23848 | CX5g037231 | LOC_Os05g38380 | Os05g0458200 | - | Detail |
| C1H5g01083 | 5:18,408,715-18,411,171 | - | C2H5g08194 | CX5g038667 | LOC_Os05g38390 | Os05g0458300 | - | Detail |
| C1H5g05610 | 5:18,416,534-18,423,563 | + | C2H5g09696 | CX5g036806 | LOC_Os05g38400 | Os05g0458400 | - | Detail |
| C1H5g24539 | 5:18,424,552-18,428,196 | - | C2H5g22786 | CX5g039723 | LOC_Os05g38410 | Os05g0458500 | - | Detail |
| C1H5g13909 | 5:18,435,507-18,437,934 | + | C2H5g22786 | CX5g039152 | LOC_Os05g38410 | Os05g0458500 | - | Detail |
| C1H5g06967 | 5:18,443,058-18,450,748 | - | C2H5g14046 | CX5g037139 | LOC_Os05g38460 | Os05g0459000 | OsMYB3R2-L | Detail |
| C1H5g11303 | 5:18,457,012-18,457,689 | + | C2H5g27082 | CX5g039690 | LOC_Os05g38470 | Os05g0459300 | - | Detail |
| C1H5g22722 | 5:18,463,689-18,466,829 | + | C2H5g02762 | CX5g041038 | LOC_Os05g38480 | Os05g0459400 | - | Detail |
| C1H5g27985 | 5:18,470,177-18,474,809 | + | C2H5g17337 | CX5g037014 | LOC_Os05g38490 | Os05g0459600 | - | Detail |
| C1H5g26616 | 5:18,477,098-18,478,420 | + | C2H5g15850 | CX5g040529 | LOC_Os05g38500 | Os05g0459700 | - | Detail |
| C1H5g21244 | 5:18,484,418-18,485,614 | + | - | CX11g014589 | - | - | - | Detail |
| C1H5g21623 | 5:18,488,437-18,489,943 | + | C2H5g03630 | CX5g039696 | LOC_Os05g38520 | Os05g0459900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16658 | 5:17,482,932-17,485,177 | + | C1H5g25030 | CX5g039497 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| C2H5g05490 | 5:17,488,549-17,490,505 | + | C1H5g31746 | CX5g037692 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |
| C2H5g13079 | 5:17,491,081-17,492,994 | - | C1H5g25033 | CX5g038348 | LOC_Os05g34950 | Os05g0423500 | - | Detail |
| C2H5g08477 | 5:17,507,460-17,511,208 | + | C1H5g20302 | CX5g036706 | LOC_Os05g34980 | Os05g0424000 | OsAAP11F, AAP11F, OsAAP7, AAP7 | Detail |
| C2H5g17702 | 5:17,518,338-17,519,933 | - | C1H5g19880 | CX5g039198 | LOC_Os05g35010 | Os05g0424300 | - | Detail |
| C2H5g01235 | 5:17,530,228-17,530,689 | + | C1H5g26014 | CX5g038130 | LOC_Os05g35050 | Os05g0424700 | COPT5 | Detail |
| C2H5g19210 | 5:17,533,657-17,536,871 | - | C1H5g09390 | CX5g039042 | LOC_Os05g35060 | Os05g0424800 | - | Detail |
| C2H5g11670 | 5:17,540,323-17,546,056 | - | C1H5g14947 | CX5g037394 | LOC_Os05g35070 | Os05g0425000 | - | Detail |
| C2H5g20022 | 5:17,560,587-17,564,446 | + | C1H5g09442 | CX5g040956 | LOC_Os05g35110 | Os05g0425700 | - | Detail |
| C2H5g25486 | 5:17,574,439-17,575,293 | + | C1H5g28152 | CX5g038358 | LOC_Os05g35140 | Os05g0426000 | OsSWEET1b | Detail |
| C2H5g16085 | 5:17,575,645-17,577,549 | + | C1H5g25816 | CX5g040098 | LOC_Os05g35160 | Os05g0426100 | - | Detail |
| C2H5g06015 | 5:17,578,020-17,582,180 | - | C1H5g10910 | CX5g039886 | LOC_Os05g35170 | Os05g0426200 | IDEF2 | Detail |
| C2H5g25451 | 5:17,584,620-17,588,248 | + | C1H5g26456 | CX5g040670 | LOC_Os05g35190 | Os05g0426300 | - | Detail |
| C2H5g25115 | 5:17,588,374-17,593,833 | - | C1H5g31800 | CX5g040243 | LOC_Os05g35200 | Os05g0426400 | - | Detail |
| C2H5g27233 | 5:17,622,230-17,624,007 | + | C1H5g30451 | CX5g037277 | LOC_Os05g35230 | Os05g0426800 | - | Detail |
| C2H5g06354 | 5:17,626,370-17,626,975 | + | C1H5g08438 | CX5g037288 | LOC_Os05g35240 | Os05g0426900 | - | Detail |
| C2H5g02568 | 5:17,637,994-17,640,623 | + | C1H5g22553 | CX5g040123 | LOC_Os05g35260 | Os05g0427100 | - | Detail |
| C2H5g20250 | 5:17,644,057-17,650,581 | - | C1H5g07626 | CX5g037167 | LOC_Os05g35266 | Os05g0427200 | - | Detail |
| C2H5g08943 | 5:17,652,618-17,654,768 | - | C1H5g08356 | CX5g036951 | LOC_Os05g35290 | Os05g0427400 | - | Detail |
| C2H5g12313 | 5:17,662,829-17,666,025 | - | C1H5g09774 | CX5g040179 | LOC_Os05g26902 | Os05g0427900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |