| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g12434 | 5:17,908,515-17,909,033 | - | C2H5g12625 | CX5g039543 | LOC_Os01g63800 | Os05g0447000 | - | Detail |
| C1H5g27944 | 5:17,914,383-17,920,136 | - | C2H5g25449 | CX5g036820 | LOC_Os05g37470 | Os05g0447200 | - | Detail |
| C1H5g12420 | 5:17,930,866-17,947,371 | - | C2H5g25292 | CX5g036851 | LOC_Os05g37500 | Os05g0447580 | - | Detail |
| C1H5g24273 | 5:17,951,935-17,953,651 | - | C2H5g15162 | CX5g040386 | LOC_Os05g37520 | Os05g0447700 | - | Detail |
| C1H5g03822 | 5:17,965,997-17,970,066 | + | C2H5g11261 | CX5g039030 | LOC_Os05g37600 | Os05g0448300 | - | Detail |
| C1H5g28240 | 5:17,983,558-17,984,565 | + | C2H5g08320 | CX5g039241 | LOC_Os05g37640 | Os05g0448675 | - | Detail |
| C1H5g23210 | 5:17,985,368-17,988,998 | - | C2H5g04056 | CX5g040111 | LOC_Os05g37660 | Os05g0449200 | - | Detail |
| C1H5g08417 | 5:18,002,067-18,005,035 | + | C2H5g04693 | CX5g037128 | LOC_Os05g37690 | Os05g0449500 | OsCOI1b, OsCOI1H, OsFbox260, Os_F0646 | Detail |
| C1H5g11760 | 5:18,007,705-18,008,679 | - | - | - | - | - | - | Detail |
| C1H5g01253 | 5:18,013,707-18,018,179 | + | C2H5g26890 | CX5g040292 | LOC_Os05g37700 | Os05g0449600 | - | Detail |
| C1H5g19157 | 5:18,027,523-18,028,593 | - | C2H5g03693 | CX5g037176 | LOC_Os05g37730 | Os05g0449900 | Os2R_MYB57 | Detail |
| C1H5g14659 | 5:18,054,743-18,055,554 | + | C2H5g27025 | CX5g037869 | LOC_Os05g37780 | Os05g0450300 | - | Detail |
| C1H5g01767 | 5:18,070,624-18,072,612 | + | C2H5g25395 | CX5g039495 | LOC_Os05g37800 | Os05g0450600 | - | Detail |
| C1H5g07138 | 5:18,084,762-18,088,447 | + | C2H5g19098 | CX5g038272 | LOC_Os05g37820 | Os05g0451100 | OsPHT4;2 | Detail |
| C1H5g30639 | 5:18,088,988-18,091,070 | - | C2H5g23791 | CX5g039929 | LOC_Os05g37830 | Os05g0451300 | - | Detail |
| C1H5g02168 | 5:18,102,688-18,106,650 | + | C2H5g16211 | CX5g038310 | LOC_Os05g37880 | Os05g0451900 | - | Detail |
| C1H5g16782 | 5:18,125,599-18,129,272 | + | C2H5g20030 | CX5g039202 | LOC_Os05g37900 | Os05g0452800 | - | Detail |
| C1H5g18778 | 5:18,136,424-18,140,608 | - | C2H5g10306 | CX5g037978 | LOC_Os05g37910 | Os05g0452900 | OsIPCS2 | Detail |
| C1H5g17967 | 5:18,160,153-18,162,777 | - | C2H5g09041 | CX5g039197 | LOC_Os05g37930 | Os05g0453300 | - | Detail |
| C1H5g08818 | 5:18,182,239-18,186,111 | - | C2H5g15966 | CX5g040447 | LOC_Os05g37950 | Os05g0453500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14587 | 4:25,910,918-25,914,065 | + | C1H4g08529 | CX4g031568 | LOC_Os04g50920 | Os04g0597300 | OsWRKY37 | Detail |
| C2H4g10163 | 4:25,920,589-25,923,939 | + | C1H4g06047 | CX4g032482 | LOC_Os04g50930 | Os04g0597400 | OsNPF7.6 | Detail |
| C2H4g28892 | 4:25,929,260-25,931,882 | + | C1H4g02149 | CX4g035098 | LOC_Os04g50940 | Os04g0597600 | OsNPF7.4a, OsNPF7.4 | Detail |
| C2H4g23843 | 4:25,934,133-25,937,592 | + | C1H4g05496 | CX4g035098 | LOC_Os04g50950 | Os04g0597800 | OsPTR6, OsNPF7.3 | Detail |
| C2H4g13606 | 4:25,939,410-25,942,239 | + | C1H4g28441 | CX4g032040 | LOC_Os04g50960 | Os04g0597900 | - | Detail |
| C2H4g26740 | 4:25,943,074-25,945,753 | - | C1H4g06669 | CX4g036258 | LOC_Os04g50970 | Os04g0598000 | - | Detail |
| C2H4g23664 | 4:25,951,331-25,951,831 | + | - | CX4g032903 | LOC_Os04g50990 | Os04g0598200 | - | Detail |
| C2H4g22999 | 4:25,953,653-25,956,392 | - | C1H4g18615 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C2H4g16283 | 4:25,966,213-25,968,916 | + | C1H4g12663 | CX4g032270 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C2H4g19837 | 4:25,979,243-25,984,049 | + | C1H4g19687 | CX4g033918 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C2H4g26708 | 4:25,984,843-25,987,348 | - | C1H4g27427 | CX4g033732 | LOC_Os04g51040 | Os04g0598900 | - | Detail |
| C2H4g23112 | 4:25,990,395-25,992,751 | - | C1H4g27024 | CX4g034393 | LOC_Os04g51050 | Os04g0599000 | - | Detail |
| C2H4g27441 | 4:25,994,811-26,000,739 | - | C1H4g02875 | CX4g033004 | LOC_Os04g51060 | Os02g0700000 | - | Detail |
| C2H4g22306 | 4:26,004,241-26,006,549 | - | C1H4g14973 | CX4g034139 | LOC_Os04g51070 | Os04g0599300 | EAT1, OsbHLH141, EAT1/DTD1, bHLH141, DTD1, DTD | Detail |
| C2H4g03863 | 4:26,011,461-26,017,698 | + | C1H4g26976 | CX4g034652 | LOC_Os04g51080 | Os04g0599400 | - | Detail |
| C2H4g03311 | 4:26,020,975-26,035,049 | + | C1H4g19631 | CX4g033723 | LOC_Os04g51090 | Os04g0599650 | - | Detail |
| C2H4g27597 | 4:26,035,983-26,038,810 | + | C1H4g29659 | CX4g034671 | LOC_Os04g51100 | Os04g0599700 | - | Detail |
| C2H4g20047 | 4:26,039,513-26,042,411 | + | C1H4g20555 | CX4g033831 | LOC_Os04g51110 | Os04g0599800 | CDC20.1 | Detail |
| C2H4g05473 | 4:26,042,841-26,047,868 | + | C1H4g01630 | CX4g035744 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| C2H4g10442 | 4:26,050,574-26,052,329 | + | C1H4g04836 | CX4g035030 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |