| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g12434 | 5:17,908,515-17,909,033 | - | C2H5g12625 | CX5g039543 | LOC_Os01g63800 | Os05g0447000 | - | Detail |
| C1H5g27944 | 5:17,914,383-17,920,136 | - | C2H5g25449 | CX5g036820 | LOC_Os05g37470 | Os05g0447200 | - | Detail |
| C1H5g12420 | 5:17,930,866-17,947,371 | - | C2H5g25292 | CX5g036851 | LOC_Os05g37500 | Os05g0447580 | - | Detail |
| C1H5g24273 | 5:17,951,935-17,953,651 | - | C2H5g15162 | CX5g040386 | LOC_Os05g37520 | Os05g0447700 | - | Detail |
| C1H5g03822 | 5:17,965,997-17,970,066 | + | C2H5g11261 | CX5g039030 | LOC_Os05g37600 | Os05g0448300 | - | Detail |
| C1H5g28240 | 5:17,983,558-17,984,565 | + | C2H5g08320 | CX5g039241 | LOC_Os05g37640 | Os05g0448675 | - | Detail |
| C1H5g23210 | 5:17,985,368-17,988,998 | - | C2H5g04056 | CX5g040111 | LOC_Os05g37660 | Os05g0449200 | - | Detail |
| C1H5g08417 | 5:18,002,067-18,005,035 | + | C2H5g04693 | CX5g037128 | LOC_Os05g37690 | Os05g0449500 | OsCOI1b, OsCOI1H, OsFbox260, Os_F0646 | Detail |
| C1H5g11760 | 5:18,007,705-18,008,679 | - | - | - | - | - | - | Detail |
| C1H5g01253 | 5:18,013,707-18,018,179 | + | C2H5g26890 | CX5g040292 | LOC_Os05g37700 | Os05g0449600 | - | Detail |
| C1H5g19157 | 5:18,027,523-18,028,593 | - | C2H5g03693 | CX5g037176 | LOC_Os05g37730 | Os05g0449900 | Os2R_MYB57 | Detail |
| C1H5g14659 | 5:18,054,743-18,055,554 | + | C2H5g27025 | CX5g037869 | LOC_Os05g37780 | Os05g0450300 | - | Detail |
| C1H5g01767 | 5:18,070,624-18,072,612 | + | C2H5g25395 | CX5g039495 | LOC_Os05g37800 | Os05g0450600 | - | Detail |
| C1H5g07138 | 5:18,084,762-18,088,447 | + | C2H5g19098 | CX5g038272 | LOC_Os05g37820 | Os05g0451100 | OsPHT4;2 | Detail |
| C1H5g30639 | 5:18,088,988-18,091,070 | - | C2H5g23791 | CX5g039929 | LOC_Os05g37830 | Os05g0451300 | - | Detail |
| C1H5g02168 | 5:18,102,688-18,106,650 | + | C2H5g16211 | CX5g038310 | LOC_Os05g37880 | Os05g0451900 | - | Detail |
| C1H5g16782 | 5:18,125,599-18,129,272 | + | C2H5g20030 | CX5g039202 | LOC_Os05g37900 | Os05g0452800 | - | Detail |
| C1H5g18778 | 5:18,136,424-18,140,608 | - | C2H5g10306 | CX5g037978 | LOC_Os05g37910 | Os05g0452900 | OsIPCS2 | Detail |
| C1H5g17967 | 5:18,160,153-18,162,777 | - | C2H5g09041 | CX5g039197 | LOC_Os05g37930 | Os05g0453300 | - | Detail |
| C1H5g08818 | 5:18,182,239-18,186,111 | - | C2H5g15966 | CX5g040447 | LOC_Os05g37950 | Os05g0453500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17144 | 1:35,452,537-35,455,604 | + | C1H1g24083 | CX1g002654 | LOC_Os01g69040 | Os01g0919500 | - | Detail |
| C2H1g22206 | 1:35,463,866-35,466,764 | + | C1H1g24488 | CX1g001203 | LOC_Os01g69050 | Os01g0919600 | - | Detail |
| C2H1g29537 | 1:35,467,685-35,470,766 | + | C1H1g20104 | CX1g005901 | LOC_Os01g69060 | Os01g0919700 | - | Detail |
| C2H1g27432 | 1:35,471,143-35,477,314 | - | C1H1g05233 | CX1g003243 | LOC_Os01g69070 | Os01g0919800 | - | Detail |
| C2H1g17576 | 1:35,480,892-35,485,118 | - | C1H1g07064 | CX1g004468 | LOC_Os01g69080 | Os01g0919900 | - | Detail |
| C2H1g29795 | 1:35,492,919-35,497,341 | - | C1H1g22004 | CX1g001843 | LOC_Os01g69090 | Os01g0920000 | - | Detail |
| C2H1g14245 | 1:35,514,303-35,516,271 | + | C1H1g22093 | CX1g003295 | LOC_Os01g69100 | Os01g0920100 | - | Detail |
| C2H1g29600 | 1:35,517,612-35,519,683 | - | C1H1g30726 | CX1g000176 | LOC_Os01g69110 | Os01g0920200 | - | Detail |
| C2H1g21628 | 1:35,522,033-35,529,635 | + | C1H1g16048 | CX1g003195 | LOC_Os01g69120 | Os01g0920300 | - | Detail |
| C2H1g17133 | 1:35,529,711-35,537,879 | - | C1H1g14453 | CX1g001019 | LOC_Os01g69130 | Os01g0920400 | - | Detail |
| C2H1g29507 | 1:35,541,830-35,543,528 | + | C1H1g09369 | - | LOC_Os01g69140 | Os01g0920500 | - | Detail |
| C2H1g19096 | 1:35,550,500-35,553,337 | + | C1H1g20161 | - | LOC_Os01g69160 | Os01g0920700 | - | Detail |
| C2H1g19978 | 1:35,556,453-35,556,959 | - | - | - | - | - | - | Detail |
| C2H1g02874 | 1:35,559,469-35,562,106 | + | C1H1g18511 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C2H1g14807 | 1:35,563,215-35,565,043 | + | C1H1g26741 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C2H1g26257 | 1:35,566,705-35,569,727 | + | C1H1g17831 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C2H1g02715 | 1:35,571,503-35,572,813 | + | C1H1g03135 | - | LOC_Os01g69200 | Os01g0921100 | - | Detail |
| C2H1g30128 | 1:35,574,349-35,582,716 | + | C1H1g30764 | CX1g002078 | LOC_Os01g69210 | Os01g0921200 | OsMOGS | Detail |
| C2H1g16671 | 1:35,583,795-35,586,898 | + | C1H1g26651 | CX1g003739 | LOC_Os01g69220 | Os01g0921300 | - | Detail |
| C2H1g02106 | 1:35,588,620-35,590,572 | + | C1H1g12748 | CX1g001141 | LOC_Os01g69230 | Os01g0921400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |