| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03898 | 5:17,709,305-17,709,709 | - | C2H5g23100 | CX5g037991 | LOC_Os05g37030 | Os05g0442000 | - | Detail |
| C1H5g24883 | 5:17,731,753-17,732,698 | - | C2H5g23234 | CX5g037273 | LOC_Os05g37050 | Os05g0442400 | MID1, OsMYB-1 | Detail |
| C1H5g10359 | 5:17,736,152-17,736,969 | - | C2H5g00840 | CX5g037170 | LOC_Os05g37060 | Os05g0442400 | MID1, OsMYB-1 | Detail |
| C1H5g08191 | 5:17,742,795-17,744,024 | - | C2H5g00201 | CX5g040230 | LOC_Os05g37080 | Os05g0442700 | - | Detail |
| C1H5g19867 | 5:17,765,354-17,770,821 | - | C2H5g28484 | CX5g039130 | LOC_Os05g37120 | Os05g0443300 | - | Detail |
| C1H5g09712 | 5:17,772,921-17,776,486 | - | C2H5g27590 | CX5g039104 | LOC_Os05g37130 | Os05g0443400 | - | Detail |
| C1H5g30431 | 5:17,779,232-17,779,678 | - | C2H5g23800 | CX1g006506 | LOC_Os05g37140 | Os05g0443500 | - | Detail |
| C1H5g02201 | 5:17,781,355-17,784,937 | - | C2H5g20139 | CX5g036774 | LOC_Os05g37150 | Os05g0443700 | - | Detail |
| C1H5g03814 | 5:17,785,187-17,788,866 | - | C2H5g16230 | CX5g036747 | LOC_Os05g37160 | Os05g0443800 | - | Detail |
| C1H5g18939 | 5:17,793,828-17,797,941 | + | C2H5g21089 | CX5g040832 | LOC_Os05g37170 | Os05g0443900 | OsLG2L | Detail |
| C1H5g18403 | 5:17,805,579-17,807,369 | + | C2H5g30678 | CX5g041157 | LOC_Os05g37190 | Os05g0444200 | - | Detail |
| C1H5g26308 | 5:17,818,831-17,823,470 | + | C2H5g05442 | CX5g039100 | LOC_Os05g37200 | Os05g0444300 | - | Detail |
| C1H5g17523 | 5:17,828,710-17,830,698 | + | C2H5g05266 | CX5g039100 | LOC_Os05g37210 | Os05g0444500 | - | Detail |
| C1H5g21085 | 5:17,835,135-17,835,566 | - | C2H5g02726 | - | - | - | - | Detail |
| C1H5g15251 | 5:17,854,579-17,856,138 | + | C2H5g19880 | CX5g037707 | LOC_Os05g37250 | Os05g0445100 | - | Detail |
| C1H5g10165 | 5:17,867,673-17,869,811 | + | C2H5g22436 | CX5g036986 | LOC_Os05g37330 | Os05g0445500 | - | Detail |
| C1H5g16582 | 5:17,871,676-17,874,581 | + | C2H5g19823 | CX5g039380 | LOC_Os05g37340 | Os05g0445800 | - | Detail |
| C1H5g23261 | 5:17,875,742-17,886,751 | - | C2H5g27548 | CX5g037841 | LOC_Os05g37410 | Os05g0446600 | DNG704 | Detail |
| C1H5g23416 | 5:17,890,768-17,898,864 | - | C2H5g29688 | CX5g040916 | LOC_Os05g37434 | Os05g0446800 | - | Detail |
| C1H5g20294 | 5:17,902,433-17,904,833 | - | C2H5g22596 | CX5g040141 | LOC_Os05g37450 | Os05g0446900 | SBDCP2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18005 | 4:28,958,297-28,965,623 | + | C1H4g30184 | CX4g031899 | LOC_Os04g56290 | Os04g0658000 | - | Detail |
| C2H4g01069 | 4:28,968,608-28,969,891 | + | - | CX4g031896 | LOC_Os04g56300 | Os04g0658100 | - | Detail |
| C2H4g30081 | 4:28,972,092-28,975,955 | - | C1H4g18631 | - | LOC_Os04g56309 | Os04g0658200 | - | Detail |
| C2H4g07943 | 4:28,977,845-28,982,005 | - | C1H4g22426 | CX4g035564 | LOC_Os04g56320 | Os04g0658300 | - | Detail |
| C2H4g15217 | 4:28,982,958-28,984,877 | + | C1H4g02567 | CX4g034664 | LOC_Os04g56330 | Os04g0658400 | - | Detail |
| C2H4g30309 | 4:28,988,221-28,989,894 | - | - | CX4g033328 | LOC_Os04g56350 | Os04g0658600 | - | Detail |
| C2H4g01057 | 4:28,991,734-28,993,491 | + | C1H4g14487 | CX4g032825 | LOC_Os04g56360 | Os04g0658700 | - | Detail |
| C2H4g20129 | 4:29,001,852-29,002,121 | - | - | - | LOC_Os04g56370 | Os04g0658800 | - | Detail |
| C2H4g03523 | 4:29,011,279-29,011,864 | + | C1H4g05647 | CX4g035898 | LOC_Os04g56390 | Os04g0659000 | - | Detail |
| C2H4g04887 | 4:29,012,440-29,016,377 | - | C1H4g10806 | CX4g036192 | LOC_Os04g56400 | Os04g0659100 | - | Detail |
| C2H4g04584 | 4:29,017,490-29,020,303 | - | C1H4g14313 | CX4g033838 | LOC_Os04g56405 | Os04g0659150 | - | Detail |
| C2H4g03636 | 4:29,021,964-29,027,624 | + | - | - | - | - | - | Detail |
| C2H4g18642 | 4:29,029,029-29,029,805 | + | C1H4g18497 | - | LOC_Os04g56430 | Os04g0659300 | OsRMC, OsRLK, OsDUF26 | Detail |
| C2H4g27064 | 4:29,030,558-29,034,807 | + | C1H4g07874 | CX4g035777 | LOC_Os04g56440 | Os04g0659400 | - | Detail |
| C2H4g24328 | 4:29,035,159-29,039,250 | - | C1H4g27386 | CX4g036481 | LOC_Os04g56450 | Os04g0659500 | - | Detail |
| C2H4g10685 | 4:29,041,839-29,042,900 | + | C1H4g14580 | - | LOC_Os04g56460 | Os04g0625600 | - | Detail |
| C2H4g12106 | 4:29,044,518-29,046,873 | + | C1H4g18216 | CX4g034160 | LOC_Os04g56470 | Os04g0659800 | OsAAP14 | Detail |
| C2H4g12958 | 4:29,047,404-29,055,003 | + | C1H4g27663 | CX4g035966 | LOC_Os04g56480 | Os04g0659900 | LML1, OsPELOTA, splHM47, spl<sup>HM47</sup> | Detail |
| C2H4g09310 | 4:29,058,703-29,059,029 | + | - | CX4g033578 | LOC_Os04g56490 | Os04g0660000 | - | Detail |
| C2H4g03651 | 4:29,065,815-29,066,423 | - | - | CX4g032744 | LOC_Os04g56500 | Os04g0660100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |