| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g13583 | 5:17,416,334-17,416,833 | + | C2H5g13177 | - | LOC_Os05g35810 | Os05g0433800 | - | Detail |
| C1H5g25303 | 5:17,419,514-17,420,011 | + | C2H5g26881 | - | LOC_Os05g35820 | Os05g0433800 | - | Detail |
| C1H5g17158 | 5:17,427,082-17,427,982 | + | C2H5g03288 | - | LOC_Os05g35830 | Os05g0433800 | - | Detail |
| C1H5g08953 | 5:17,432,611-17,433,898 | + | C2H5g30662 | - | LOC_Os05g35840 | Os05g0433900 | - | Detail |
| C1H5g17639 | 5:17,438,282-17,438,657 | + | C2H5g03920 | - | LOC_Os05g35910 | Os05g0434600 | - | Detail |
| C1H5g12092 | 5:17,443,568-17,443,882 | + | C2H5g06171 | - | LOC_Os05g35910 | Os05g0434600 | - | Detail |
| C1H5g13407 | 5:17,445,216-17,447,963 | + | C2H5g19495 | - | LOC_Os05g35930 | Os05g0433800 | - | Detail |
| C1H5g02216 | 5:17,447,987-17,448,274 | + | C2H5g03587 | - | LOC_Os05g35930 | Os05g0434800 | - | Detail |
| C1H5g15023 | 5:17,452,450-17,453,097 | + | C2H5g19594 | - | LOC_Os05g35950 | Os05g0435100 | - | Detail |
| C1H5g07922 | 5:17,462,501-17,463,430 | + | C2H5g15976 | - | LOC_Os05g35960 | Os05g0435300 | - | Detail |
| C1H5g23701 | 5:17,464,040-17,464,369 | - | C2H5g18930 | CX5g038126 | LOC_Os05g35970 | Os05g0435400 | - | Detail |
| C1H5g26729 | 5:17,465,209-17,465,860 | - | C2H5g29995 | - | - | - | - | Detail |
| C1H5g26254 | 5:17,468,973-17,470,610 | + | C2H5g12561 | CX5g040795 | LOC_Os05g36000 | Os05g0435700 | - | Detail |
| C1H5g14137 | 5:17,471,895-17,474,168 | - | C2H5g18314 | CX5g038284 | LOC_Os05g36010 | Os05g0435800 | - | Detail |
| C1H5g21927 | 5:17,480,946-17,484,185 | - | C2H5g30176 | CX5g041041 | LOC_Os05g36050 | Os05g0436100 | - | Detail |
| C1H5g16259 | 5:17,492,987-17,499,420 | + | C2H2g17690 | CX5g039484 | LOC_Os05g36070 | Os05g0436400 | - | Detail |
| C1H5g00945 | 5:17,506,567-17,510,533 | + | C2H5g24518 | CX5g038521 | LOC_Os05g36090 | Os05g0436900 | - | Detail |
| C1H5g20450 | 5:17,521,959-17,522,910 | + | C2H5g25424 | - | LOC_Os05g36100 | Os05g0437050 | - | Detail |
| C1H5g30900 | 5:17,526,288-17,526,980 | + | C2H5g23889 | CX5g038881 | LOC_Os05g36100 | Os05g0437100 | - | Detail |
| C1H5g13619 | 5:17,528,695-17,532,669 | + | C2H5g26705 | CX5g040437 | LOC_Os05g36110 | Os05g0437200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g00465 | 4:21,949,305-21,949,736 | - | C1H4g16892 | - | LOC_Os04g42850 | - | - | Detail |
| C2H4g23428 | 4:21,955,992-21,961,795 | + | C1H4g02011 | CX4g033250 | LOC_Os04g42860 | Os04g0507700 | - | Detail |
| C2H4g12434 | 4:21,962,396-21,964,296 | - | C1H4g25437 | CX4g036242 | LOC_Os04g42870 | Os04g0507800 | - | Detail |
| C2H4g04255 | 4:21,964,471-21,966,166 | + | C1H4g05518 | CX4g032853 | LOC_Os04g42880 | Os04g0507900 | - | Detail |
| C2H4g13577 | 4:21,969,979-21,970,602 | - | - | CX4g035638 | LOC_Os04g42889 | - | - | Detail |
| C2H4g02916 | 4:21,971,608-21,974,671 | - | C1H4g12307 | CX4g033139 | LOC_Os04g42900 | Os04g0508000 | - | Detail |
| C2H4g04232 | 4:21,975,336-21,978,353 | + | C1H4g06876 | CX4g032690 | LOC_Os04g42910 | Os04g0508100 | - | Detail |
| C2H4g05860 | 4:21,979,292-21,984,831 | + | C1H4g08533 | CX4g033875 | LOC_Os04g42920 | Os04g0508200 | - | Detail |
| C2H4g05577 | 4:21,986,204-21,988,757 | + | C1H4g17316 | CX4g035105 | LOC_Os04g42930 | Os04g0508300 | OsGrxC2.2 | Detail |
| C2H4g08577 | 4:21,989,395-21,990,537 | - | - | CX4g036552 | LOC_Os04g42940 | Os04g0508400 | - | Detail |
| C2H4g24307 | 4:21,993,729-21,995,690 | - | C1H4g28976 | CX4g036081 | LOC_Os04g42950 | Os04g0508500 | Os2R_MYB45 | Detail |
| C2H4g01800 | 4:22,005,104-22,006,447 | + | C1H2g19268 | CX4g034855 | LOC_Os04g42960 | Os04g0508600 | - | Detail |
| C2H4g15606 | 4:22,010,532-22,014,498 | - | C1H4g09744 | CX4g031554 | LOC_Os04g42980 | Os04g0508800 | - | Detail |
| C2H4g18756 | 4:22,019,614-22,023,317 | - | C1H4g09860 | CX4g035042 | LOC_Os04g42990 | Os04g0508900 | - | Detail |
| C2H4g21092 | 4:22,032,568-22,038,012 | + | C1H4g03726 | CX4g031481 | LOC_Os04g43020 | Os04g0509000 | - | Detail |
| C2H4g17989 | 4:22,038,821-22,046,565 | + | C1H4g25656 | CX4g035238 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g25209 | 4:22,046,130-22,049,928 | - | C1H4g05629 | CX4g036052 | LOC_Os04g43040 | Os04g0509200 | - | Detail |
| C2H4g20441 | 4:22,052,563-22,073,010 | - | C1H4g11981 | CX4g034232 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| C2H4g11339 | 4:22,075,791-22,076,232 | + | C1H4g16776 | CX4g036588 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| C2H4g01906 | 4:22,082,684-22,084,180 | + | C1H4g16652 | CX2g024932 | LOC_Os04g43070 | Os04g0509600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |