| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g12172 | 5:17,232,298-17,233,225 | - | C2H5g29672 | CX5g040557 | - | Os05g0194900 | - | Detail |
| C1H5g17005 | 5:17,241,782-17,245,598 | - | C2H5g16540 | CX5g040362 | LOC_Os05g35440 | Os05g0429000 | - | Detail |
| C1H5g22440 | 5:17,255,009-17,257,864 | - | C2H5g17304 | CX5g038601 | LOC_Os05g35460 | Os05g0429400 | OsSec14-15 | Detail |
| C1H5g14294 | 5:17,268,063-17,269,541 | - | C2H5g21445 | CX5g040206 | LOC_Os05g35470 | Os05g0429500 | - | Detail |
| C1H5g15484 | 5:17,271,189-17,273,603 | - | C2H5g17599 | CX5g040258 | LOC_Os05g35480 | Os05g0429700 | - | Detail |
| C1H5g07206 | 5:17,289,709-17,292,065 | - | C2H5g19149 | CX5g040733 | LOC_Os05g35500 | Os05g0429900 | Os2R_MYB55 | Detail |
| C1H5g31878 | 5:17,311,886-17,314,724 | + | C2H5g03708 | CX5g040159 | LOC_Os05g35520 | Os05g0430200 | WSL8, OsdNK1 | Detail |
| C1H5g29612 | 5:17,318,247-17,325,158 | + | C2H5g15157 | CX5g037930 | LOC_Os05g35530 | Os05g0430300 | - | Detail |
| C1H5g14215 | 5:17,325,543-17,328,315 | - | C2H5g00279 | CX5g037098 | LOC_Os05g35540 | Os05g0430400 | - | Detail |
| C1H5g14117 | 5:17,330,288-17,333,531 | - | C2H5g17573 | CX5g037181 | LOC_Os05g35570 | Os05g0430700 | - | Detail |
| C1H5g07334 | 5:17,335,763-17,337,382 | + | C2H5g09764 | CX5g040469 | LOC_Os05g35580 | Os05g0430800 | - | Detail |
| C1H5g03259 | 5:17,338,673-17,342,922 | - | C2H5g18718 | CX5g039914 | LOC_Os05g35594 | Os05g0430900 | - | Detail |
| C1H5g09633 | 5:17,345,840-17,353,788 | - | C2H5g16055 | CX5g038608 | LOC_Os05g35650 | Os05g0431700 | - | Detail |
| C1H5g09210 | 5:17,377,197-17,378,321 | + | C2H5g06148 | CX5g039496 | LOC_Os05g35690 | Os05g0432200 | - | Detail |
| C1H5g28604 | 5:17,384,147-17,387,251 | + | C2H5g11935 | CX5g040751 | LOC_Os05g35710 | Os05g0432400 | - | Detail |
| C1H5g12630 | 5:17,388,087-17,389,554 | + | C2H5g09659 | CX5g040765 | LOC_Os05g35720 | Os05g0432500 | - | Detail |
| C1H5g08283 | 5:17,390,038-17,396,590 | - | C2H5g06762 | CX5g038931 | LOC_Os05g35730 | Os05g0432600 | - | Detail |
| C1H5g28778 | 5:17,397,003-17,399,252 | - | C2H5g05683 | CX5g039477 | LOC_Os05g35740 | Os05g0432700 | - | Detail |
| C1H5g16916 | 5:17,402,585-17,405,520 | - | C2H5g04377 | CX5g037987 | LOC_Os05g35770 | Os05g0433100 | - | Detail |
| C1H5g16667 | 5:17,409,811-17,410,626 | + | C2H5g12046 | - | LOC_Os05g35800 | Os05g0435100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23186 | 1:27,269,220-27,271,527 | + | C1H1g25026 | CX1g000184 | LOC_Os01g53240 | Os01g0733500 | - | Detail |
| C2H1g16933 | 1:27,272,531-27,277,968 | - | C1H1g17481 | CX1g001304 | LOC_Os01g53250 | Os01g0733600 | - | Detail |
| C2H1g28398 | 1:27,285,980-27,289,362 | + | C1H1g18098 | CX1g001858 | LOC_Os01g53260 | Os01g0734000 | OsWRKY23 | Detail |
| C2H1g03923 | 1:27,293,250-27,293,800 | + | C1H1g05786 | CX1g006620 | LOC_Os01g53280 | Os01g0734100 | - | Detail |
| C2H1g19534 | 1:27,304,010-27,311,886 | + | C1H1g09802 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C2H1g09241 | 1:27,326,536-27,327,972 | + | C1H1g16727 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C2H1g27577 | 1:27,338,608-27,340,083 | + | C1H1g17596 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C2H1g28000 | 1:27,363,984-27,365,414 | - | C1H1g12410 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C2H1g20968 | 1:27,364,009-27,365,288 | + | - | - | - | Os01g0735450 | - | Detail |
| C2H1g21886 | 1:27,365,328-27,367,380 | + | - | - | - | - | - | Detail |
| C2H1g03039 | 1:27,370,524-27,371,948 | - | C1H1g11199 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C2H1g19693 | 1:27,379,721-27,381,136 | - | C1H1g10989 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C2H1g23129 | 1:27,381,416-27,384,963 | + | C1H1g04228 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C2H1g09664 | 1:27,386,344-27,387,096 | + | C1H1g11257 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C2H1g22559 | 1:27,401,377-27,403,368 | + | C1H1g18188 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C2H1g29848 | 1:27,411,208-27,418,789 | + | C1H1g17501 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C2H1g21171 | 1:27,420,379-27,421,816 | + | C1H1g26053 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C2H1g23141 | 1:27,421,843-27,422,460 | + | C1H1g26053 | CX1g007234 | - | Os01g0221600 | OsALMT4 | Detail |
| C2H1g28481 | 1:27,428,371-27,429,000 | + | C1H1g28789 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C2H1g06822 | 1:27,430,737-27,435,013 | - | C1H1g20246 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |