| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g09390 | 5:17,051,029-17,054,248 | - | C2H5g19210 | CX5g039042 | LOC_Os05g35060 | Os05g0424800 | - | Detail |
| C1H5g14947 | 5:17,057,704-17,063,427 | - | C2H5g11670 | CX5g037394 | LOC_Os05g35070 | Os05g0425000 | - | Detail |
| C1H5g10575 | 5:17,077,097-17,077,447 | + | - | - | - | - | - | Detail |
| C1H5g09442 | 5:17,078,786-17,082,651 | + | C2H5g20022 | CX5g040956 | LOC_Os05g35110 | Os05g0425700 | - | Detail |
| C1H5g28152 | 5:17,092,647-17,093,486 | + | C2H5g25486 | CX5g038358 | LOC_Os05g35140 | Os05g0426000 | OsSWEET1b | Detail |
| C1H5g25816 | 5:17,093,819-17,095,725 | + | C2H5g16085 | CX5g040098 | LOC_Os05g35160 | Os05g0426100 | - | Detail |
| C1H5g10910 | 5:17,096,707-17,100,879 | - | C2H5g06015 | CX5g039886 | LOC_Os05g35170 | Os05g0426200 | IDEF2 | Detail |
| C1H5g26456 | 5:17,105,425-17,109,092 | + | C2H5g25451 | CX5g040670 | LOC_Os05g35190 | Os05g0426300 | - | Detail |
| C1H5g31800 | 5:17,109,217-17,114,916 | - | C2H5g25115 | CX5g040243 | LOC_Os05g35200 | Os05g0426400 | - | Detail |
| C1H5g30451 | 5:17,143,902-17,145,671 | + | C2H5g27233 | CX5g037277 | LOC_Os05g35230 | Os05g0426800 | - | Detail |
| C1H5g08438 | 5:17,148,312-17,148,887 | + | C2H5g06354 | CX5g037288 | LOC_Os05g35240 | Os05g0426900 | - | Detail |
| C1H5g22553 | 5:17,152,110-17,154,768 | + | C2H5g02568 | CX5g040123 | LOC_Os05g35260 | Os05g0427100 | - | Detail |
| C1H5g07626 | 5:17,158,050-17,164,574 | - | C2H5g20250 | CX5g037167 | LOC_Os05g35266 | Os05g0427200 | - | Detail |
| C1H5g08356 | 5:17,166,839-17,168,989 | - | C2H5g08943 | CX5g036951 | LOC_Os05g35290 | Os05g0427400 | - | Detail |
| C1H5g09774 | 5:17,177,354-17,180,551 | - | C2H5g12313 | CX5g040179 | LOC_Os05g26902 | Os05g0427900 | - | Detail |
| C1H5g05769 | 5:17,184,686-17,184,901 | - | C2H5g19904 | CX5g038636 | LOC_Os05g35350 | Os05g0428000 | - | Detail |
| C1H5g30475 | 5:17,187,027-17,199,424 | - | C2H5g10232 | CX5g041033 | LOC_Os05g35360 | Os05g0428100 | - | Detail |
| C1H5g21222 | 5:17,205,303-17,207,844 | - | C2H5g07719 | CX5g038421 | LOC_Os05g35380 | Os05g0428400 | - | Detail |
| C1H5g31639 | 5:17,220,432-17,222,477 | - | C2H5g26795 | CX5g037691 | LOC_Os05g35400 | Os05g0428600 | OsBiP4 | Detail |
| C1H5g14970 | 5:17,223,922-17,230,046 | - | C2H5g29329 | CX5g039770 | LOC_Os05g35410 | Os05g0428700 | OsAKT2, OsK3.1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g20992 | 6:20,786,978-20,788,881 | + | C1H6g05226 | CX6g044623 | LOC_Os06g39906 | Os06g0601000 | - | Detail |
| C2H6g28120 | 6:20,804,013-20,806,774 | + | C1H6g03363 | CX6g042659 | LOC_Os06g39960 | Os06g0601500 | OsbZIP48, OsHY5L2 | Detail |
| C2H6g17237 | 6:20,807,903-20,811,157 | + | C1H6g30468 | CX6g042583 | LOC_Os06g39970 | Os06g0601600 | OsCESA11 | Detail |
| C2H6g29039 | 6:20,821,571-20,826,537 | + | C1H6g18591 | CX6g044674 | LOC_Os06g40020 | Os06g0602400 | OsRH52A | Detail |
| C2H6g11572 | 6:20,841,490-20,843,038 | + | C1H6g01432 | CX6g045252 | LOC_Os06g40040 | Os06g0602600 | - | Detail |
| C2H6g05068 | 6:20,843,594-20,847,246 | - | C1H6g22569 | CX6g041818 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| C2H6g14435 | 6:20,862,399-20,866,430 | + | C1H6g14736 | CX6g042177 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| C2H6g04094 | 6:20,867,690-20,870,961 | - | C1H6g19546 | CX6g041181 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| C2H6g04563 | 6:20,873,487-20,876,999 | - | C1H6g00043 | CX6g043114 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| C2H6g18680 | 6:20,895,801-20,899,841 | - | C1H6g11187 | CX6g043946 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| C2H6g21981 | 6:20,916,404-20,917,475 | - | C1H6g05477 | CX6g044688 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| C2H6g11228 | 6:20,925,550-20,928,685 | - | C1H6g20423 | CX6g045934 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| C2H6g10259 | 6:20,936,778-20,938,125 | + | - | - | - | - | - | Detail |
| C2H6g26456 | 6:20,939,165-20,942,144 | + | C1H6g10180 | CX6g045594 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| C2H6g06437 | 6:20,946,189-20,949,815 | + | C1H6g27795 | CX6g041305 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| C2H6g13702 | 6:20,952,820-20,956,957 | + | C1H6g25357 | CX6g042132 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| C2H6g02651 | 6:20,967,982-20,968,696 | + | C1H6g04884 | CX6g044895 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| C2H6g13160 | 6:20,976,308-20,977,652 | - | C1H6g20614 | CX6g045437 | LOC_Os06g40220 | - | - | Detail |
| C2H6g05081 | 6:20,988,280-20,988,522 | + | C1H6g13328 | CX6g045873 | LOC_Os06g40320 | - | - | Detail |
| C2H6g19267 | 6:21,013,433-21,015,541 | - | C1H6g27028 | CX6g045451 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |