| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20774 | 5:16,841,281-16,842,470 | - | C2H5g29392 | CX5g040586 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| C1H5g21437 | 5:16,845,789-16,849,288 | + | C2H5g16335 | CX5g039248 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| C1H5g28994 | 5:16,849,852-16,850,106 | + | C2H5g16335 | CX5g039248 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| C1H5g23153 | 5:16,865,917-16,868,590 | + | C2H5g10847 | CX5g039353 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| C1H5g19351 | 5:16,876,769-16,877,395 | - | C2H5g17369 | CX5g037413 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| C1H5g00420 | 5:16,891,565-16,897,671 | + | C2H5g20050 | CX5g040333 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| C1H5g20696 | 5:16,898,608-16,901,102 | + | C2H5g06562 | CX5g039680 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| C1H5g14092 | 5:16,916,867-16,917,433 | + | C2H5g20791 | CX5g037173 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| C1H5g19992 | 5:16,921,185-16,926,703 | + | C2H5g00178 | CX5g038029 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| C1H5g29371 | 5:16,936,022-16,937,631 | + | C2H5g17032 | CX5g039797 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| C1H5g12253 | 5:16,941,731-16,948,376 | - | C2H5g09186 | CX5g038815 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| C1H5g26623 | 5:16,949,871-16,950,461 | - | - | - | LOC_Os05g35510 | - | - | Detail |
| C1H5g11306 | 5:16,973,676-16,978,045 | - | C2H5g24092 | CX5g038799 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| C1H5g25911 | 5:16,984,700-16,991,683 | - | C2H5g03824 | CX5g038432 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| C1H5g25030 | 5:16,996,468-16,998,788 | + | C2H5g16658 | CX5g039497 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| C1H5g31746 | 5:17,003,804-17,005,757 | + | C2H5g05490 | CX5g037692 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |
| C1H5g25033 | 5:17,006,333-17,008,246 | - | C2H5g13079 | CX5g038348 | LOC_Os05g34950 | Os05g0423500 | - | Detail |
| C1H5g20302 | 5:17,022,384-17,026,129 | + | C2H5g08477 | CX5g036706 | LOC_Os05g34980 | Os05g0424000 | OsAAP11F, AAP11F, OsAAP7, AAP7 | Detail |
| C1H5g19880 | 5:17,035,699-17,037,297 | - | C2H5g17702 | CX5g039198 | LOC_Os05g35010 | Os05g0424300 | - | Detail |
| C1H5g26014 | 5:17,047,604-17,048,065 | + | C2H5g01235 | CX5g038130 | LOC_Os05g35050 | Os05g0424700 | COPT5 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08604 | 3:25,901,690-25,904,587 | + | C1H3g23851 | CX3g029652 | LOC_Os03g49720 | Os03g0704100 | - | Detail |
| C2H3g29014 | 3:25,905,274-25,908,513 | - | C1H3g07852 | CX3g027461 | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C2H3g23956 | 3:25,908,582-25,908,809 | - | C1H3g06974 | - | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C2H3g16102 | 3:25,909,309-25,914,224 | + | C1H3g28557 | CX3g029894 | LOC_Os03g49750 | Os03g0704400 | - | Detail |
| C2H3g11078 | 3:25,925,097-25,934,190 | + | C1H3g03526 | CX3g026920 | LOC_Os03g49770 | Os03g0704700 | ORP1C | Detail |
| C2H3g28946 | 3:25,949,107-25,953,644 | - | C1H3g14731 | CX3g030070 | LOC_Os03g49800 | Os03g0705300 | - | Detail |
| C2H3g19805 | 3:26,002,702-26,004,828 | + | C1H3g17034 | CX3g026164 | LOC_Os03g49830 | Os03g0705800 | - | Detail |
| C2H3g12452 | 3:26,030,474-26,031,668 | - | - | - | - | - | - | Detail |
| C2H3g12197 | 3:26,045,202-26,050,452 | - | - | - | - | - | - | Detail |
| C2H3g09610 | 3:26,060,827-26,068,073 | - | C1H3g02900 | CX3g028672 | LOC_Os03g49900 | Os03g0706900 | LE, TT3.1, DGS1 | Detail |
| C2H3g07887 | 3:26,076,876-26,079,201 | + | C1H3g20914 | CX3g028303 | LOC_Os03g49940 | Os03g0707200 | TT3.2 | Detail |
| C2H3g17433 | 3:26,080,830-26,089,167 | - | C1H3g18351 | CX3g029801 | LOC_Os03g49960 | Os03g0707300 | - | Detail |
| C2H3g19955 | 3:26,128,603-26,136,845 | - | C1H3g18483 | CX3g027756 | LOC_Os03g50010 | Os03g0707900 | - | Detail |
| C2H3g30153 | 3:26,141,627-26,143,325 | + | C1H3g03460 | CX3g025431 | LOC_Os03g50030 | Os03g0708000 | - | Detail |
| C2H3g07785 | 3:26,145,791-26,148,691 | - | C1H3g17884 | CX3g025623 | LOC_Os03g50040 | Os03g0708100 | - | Detail |
| C2H3g01941 | 3:26,155,325-26,159,076 | + | C1H3g20236 | CX3g030384 | LOC_Os03g50070 | Os03g0708400 | - | Detail |
| C2H3g11988 | 3:26,159,751-26,160,705 | - | C1H3g01824 | - | LOC_Os03g50080 | Os03g0708500 | - | Detail |
| C2H3g11307 | 3:26,163,243-26,165,468 | - | C1H3g01922 | CX3g030763 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| C2H3g20554 | 3:26,166,803-26,171,887 | - | C1H3g14178 | CX3g025191 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| C2H3g12681 | 3:26,175,044-26,175,381 | + | C1H1g20629 | - | LOC_Os07g01114 | Os12g0622200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |