| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20774 | 5:16,841,281-16,842,470 | - | C2H5g29392 | CX5g040586 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| C1H5g21437 | 5:16,845,789-16,849,288 | + | C2H5g16335 | CX5g039248 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| C1H5g28994 | 5:16,849,852-16,850,106 | + | C2H5g16335 | CX5g039248 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| C1H5g23153 | 5:16,865,917-16,868,590 | + | C2H5g10847 | CX5g039353 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| C1H5g19351 | 5:16,876,769-16,877,395 | - | C2H5g17369 | CX5g037413 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| C1H5g00420 | 5:16,891,565-16,897,671 | + | C2H5g20050 | CX5g040333 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| C1H5g20696 | 5:16,898,608-16,901,102 | + | C2H5g06562 | CX5g039680 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| C1H5g14092 | 5:16,916,867-16,917,433 | + | C2H5g20791 | CX5g037173 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| C1H5g19992 | 5:16,921,185-16,926,703 | + | C2H5g00178 | CX5g038029 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| C1H5g29371 | 5:16,936,022-16,937,631 | + | C2H5g17032 | CX5g039797 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| C1H5g12253 | 5:16,941,731-16,948,376 | - | C2H5g09186 | CX5g038815 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| C1H5g26623 | 5:16,949,871-16,950,461 | - | - | - | LOC_Os05g35510 | - | - | Detail |
| C1H5g11306 | 5:16,973,676-16,978,045 | - | C2H5g24092 | CX5g038799 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| C1H5g25911 | 5:16,984,700-16,991,683 | - | C2H5g03824 | CX5g038432 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| C1H5g25030 | 5:16,996,468-16,998,788 | + | C2H5g16658 | CX5g039497 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| C1H5g31746 | 5:17,003,804-17,005,757 | + | C2H5g05490 | CX5g037692 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |
| C1H5g25033 | 5:17,006,333-17,008,246 | - | C2H5g13079 | CX5g038348 | LOC_Os05g34950 | Os05g0423500 | - | Detail |
| C1H5g20302 | 5:17,022,384-17,026,129 | + | C2H5g08477 | CX5g036706 | LOC_Os05g34980 | Os05g0424000 | OsAAP11F, AAP11F, OsAAP7, AAP7 | Detail |
| C1H5g19880 | 5:17,035,699-17,037,297 | - | C2H5g17702 | CX5g039198 | LOC_Os05g35010 | Os05g0424300 | - | Detail |
| C1H5g26014 | 5:17,047,604-17,048,065 | + | C2H5g01235 | CX5g038130 | LOC_Os05g35050 | Os05g0424700 | COPT5 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g20622 | 2:28,393,493-28,394,206 | + | - | - | - | - | - | Detail |
| C2H2g24045 | 2:28,398,786-28,400,066 | + | C1H2g10719 | CX2g019676 | LOC_Os02g50740 | Os02g0740900 | - | Detail |
| C2H2g20295 | 2:28,402,691-28,406,400 | + | C1H2g20437 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C2H2g15348 | 2:28,408,000-28,409,280 | + | C1H2g19755 | CX2g019362 | LOC_Os02g50770 | Os02g0741200 | - | Detail |
| C2H2g20379 | 2:28,411,430-28,416,254 | + | C1H2g04090 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C2H2g26992 | 2:28,416,726-28,441,598 | - | C1H2g03541 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| C2H2g19262 | 2:28,445,324-28,446,582 | - | C1H2g24228 | CX2g020349 | LOC_Os02g50810 | Os02g0741700 | - | Detail |
| C2H2g17447 | 2:28,453,359-28,459,040 | - | C1H2g00929 | CX2g020325 | LOC_Os02g50820 | Os02g0741800 | - | Detail |
| C2H2g23000 | 2:28,461,770-28,465,935 | - | C1H2g07670 | CX2g020330 | LOC_Os02g50830 | Os02g0741900 | - | Detail |
| C2H2g04510 | 2:28,468,713-28,475,939 | + | C1H2g09428 | CX2g024454 | LOC_Os02g50840 | Os02g0742000 | - | Detail |
| C2H2g05271 | 2:28,480,866-28,488,123 | + | C1H2g30208 | CX2g022406 | LOC_Os02g50850 | Os02g0742100 | - | Detail |
| C2H2g03132 | 2:28,488,881-28,492,529 | - | C1H2g09499 | CX2g022780 | LOC_Os02g50860 | Os02g0742200 | - | Detail |
| C2H2g30575 | 2:28,503,140-28,503,778 | + | - | - | - | - | - | Detail |
| C2H2g26581 | 2:28,503,874-28,508,024 | - | C1H2g30786 | CX2g022158 | LOC_Os02g50880 | Os02g0742500 | - | Detail |
| C2H2g27845 | 2:28,518,374-28,520,904 | + | C1H2g10416 | CX2g019943 | LOC_Os02g50900 | Os02g0742700 | - | Detail |
| C2H2g13391 | 2:28,528,045-28,536,569 | - | C1H2g03421 | CX2g023679 | LOC_Os02g50910 | Os02g0742900 | - | Detail |
| C2H2g14912 | 2:28,539,227-28,542,228 | - | - | CX2g020446 | LOC_Os03g37780 | Os03g0574300 | - | Detail |
| C2H2g18301 | 2:28,546,358-28,547,548 | + | C1H2g26730 | CX2g022235 | LOC_Os02g50930 | Os02g0743100 | OsBIRF1 | Detail |
| C2H2g30022 | 2:28,550,889-28,551,395 | - | C1H6g24258 | CX2g021784 | LOC_Os02g50940 | Os02g0743200 | - | Detail |
| C2H2g19696 | 2:28,564,063-28,567,187 | - | C1H2g16987 | CX2g020591 | LOC_Os02g50960 | Os02g0743400 | OsPIN1b, REH1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |