| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20774 | 5:16,841,281-16,842,470 | - | C2H5g29392 | CX5g040586 | LOC_Os05g34680 | Os05g0419600 | - | Detail |
| C1H5g21437 | 5:16,845,789-16,849,288 | + | C2H5g16335 | CX5g039248 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| C1H5g28994 | 5:16,849,852-16,850,106 | + | C2H5g16335 | CX5g039248 | LOC_Os05g34700 | Os05g0419800 | - | Detail |
| C1H5g23153 | 5:16,865,917-16,868,590 | + | C2H5g10847 | CX5g039353 | LOC_Os05g34720 | Os05g0420200 | - | Detail |
| C1H5g19351 | 5:16,876,769-16,877,395 | - | C2H5g17369 | CX5g037413 | LOC_Os05g34730 | Os05g0420300 | ERF131, SERF1, OsERF#131, OsERF131, AP2/EREBP#094, AP2/EREBP94 | Detail |
| C1H5g00420 | 5:16,891,565-16,897,671 | + | C2H5g20050 | CX5g040333 | LOC_Os05g34760 | Os05g0420500 | - | Detail |
| C1H5g20696 | 5:16,898,608-16,901,102 | + | C2H5g06562 | CX5g039680 | LOC_Os05g34770 | Os05g0420600 | - | Detail |
| C1H5g14092 | 5:16,916,867-16,917,433 | + | C2H5g20791 | CX5g037173 | LOC_Os05g34810 | Os05g0421100 | - | Detail |
| C1H5g19992 | 5:16,921,185-16,926,703 | + | C2H5g00178 | CX5g038029 | LOC_Os05g34820 | Os05g0421300 | - | Detail |
| C1H5g29371 | 5:16,936,022-16,937,631 | + | C2H5g17032 | CX5g039797 | LOC_Os05g34830 | Os05g0421600 | - | Detail |
| C1H5g12253 | 5:16,941,731-16,948,376 | - | C2H5g09186 | CX5g038815 | LOC_Os05g34854 | Os05g0421900 | Prl5, OsGA20ox4, GA20ox4 | Detail |
| C1H5g26623 | 5:16,949,871-16,950,461 | - | - | - | LOC_Os05g35510 | - | - | Detail |
| C1H5g11306 | 5:16,973,676-16,978,045 | - | C2H5g24092 | CX5g038799 | LOC_Os05g34880 | Os05g0422300 | - | Detail |
| C1H5g25911 | 5:16,984,700-16,991,683 | - | C2H5g03824 | CX5g038432 | LOC_Os05g34900 | Os05g0422600 | - | Detail |
| C1H5g25030 | 5:16,996,468-16,998,788 | + | C2H5g16658 | CX5g039497 | LOC_Os05g34920 | Os05g0423200 | - | Detail |
| C1H5g31746 | 5:17,003,804-17,005,757 | + | C2H5g05490 | CX5g037692 | LOC_Os05g34940 | Os05g0423400 | OsMADS4 | Detail |
| C1H5g25033 | 5:17,006,333-17,008,246 | - | C2H5g13079 | CX5g038348 | LOC_Os05g34950 | Os05g0423500 | - | Detail |
| C1H5g20302 | 5:17,022,384-17,026,129 | + | C2H5g08477 | CX5g036706 | LOC_Os05g34980 | Os05g0424000 | OsAAP11F, AAP11F, OsAAP7, AAP7 | Detail |
| C1H5g19880 | 5:17,035,699-17,037,297 | - | C2H5g17702 | CX5g039198 | LOC_Os05g35010 | Os05g0424300 | - | Detail |
| C1H5g26014 | 5:17,047,604-17,048,065 | + | C2H5g01235 | CX5g038130 | LOC_Os05g35050 | Os05g0424700 | COPT5 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g01572 | 6:12,101,826-12,104,373 | + | C1H6g21775 | CX6g041290 | LOC_Os06g28550 | Os06g0479400 | - | Detail |
| C2H6g17787 | 6:12,140,516-12,143,241 | - | C1H6g26693 | CX6g042654 | LOC_Os06g27760 | Os06g0472000 | - | Detail |
| C2H6g20307 | 6:12,146,292-12,149,376 | + | C1H6g28055 | CX6g043194 | LOC_Os06g27770 | Os06g0472200 | - | Detail |
| C2H6g16745 | 6:12,155,334-12,157,262 | + | C1H6g13928 | CX6g041953 | LOC_Os06g27790 | Os06g0472300 | - | Detail |
| C2H6g23546 | 6:12,159,711-12,166,197 | + | C1H6g06716 | CX6g043241 | LOC_Os06g27800 | Os06g0472400 | - | Detail |
| C2H6g14928 | 6:12,177,157-12,180,490 | - | C1H6g09283 | CX6g042696 | LOC_Os06g27820 | Os06g0472600 | - | Detail |
| C2H6g00222 | 6:12,182,758-12,187,307 | - | C1H6g24132 | CX6g045749 | LOC_Os06g27830 | Os06g0472700 | - | Detail |
| C2H6g02911 | 6:12,196,205-12,197,509 | + | C1H6g08584 | CX6g043316 | LOC_Os06g27850 | Os06g0472900 | - | Detail |
| C2H6g30368 | 6:12,200,948-12,205,042 | - | C1H6g02757 | CX6g041871 | LOC_Os06g27860 | Os06g0473000 | OsPHS1 | Detail |
| C2H6g00393 | 6:12,214,644-12,225,572 | - | C1H6g12249 | CX6g044841 | LOC_Os06g27890 | Os06g0473200 | MKK3, OsMKK3 | Detail |
| C2H6g27648 | 6:12,238,629-12,238,964 | + | C1H6g13779 | CX6g045224 | - | Os06g0473700 | - | Detail |
| C2H6g19265 | 6:12,239,755-12,240,270 | + | - | CX6g044901 | LOC_Os06g27910 | Os06g0473800 | - | Detail |
| C2H6g25625 | 6:12,248,683-12,258,012 | - | C1H6g03161 | CX6g044575 | LOC_Os06g27970 | Os06g0474200 | OsFIP | Detail |
| C2H6g02054 | 6:12,263,314-12,264,750 | + | - | CX6g045620 | LOC_Os06g27980 | Os06g0474300 | - | Detail |
| C2H6g05701 | 6:12,271,480-12,275,193 | - | C1H6g15989 | CX6g043983 | LOC_Os06g28000 | Os06g0474500 | - | Detail |
| C2H6g23516 | 6:12,281,140-12,281,899 | - | C1H6g14721 | CX1g001472 | LOC_Os06g28030 | Os06g0474600 | - | Detail |
| C2H6g13355 | 6:12,292,435-12,295,590 | - | C1H6g09338 | CX6g043337 | LOC_Os06g28050 | Os06g0474800 | - | Detail |
| C2H6g19156 | 6:12,301,646-12,311,311 | - | C1H6g29253 | CX6g045521 | LOC_Os06g28060 | Os06g0474900 | - | Detail |
| C2H6g22900 | 6:12,335,559-12,337,176 | - | C1H6g16352 | CX6g045494 | LOC_Os06g28124 | Os06g0475400 | - | Detail |
| C2H6g08923 | 6:12,337,992-12,340,190 | - | C1H6g31009 | CX6g045494 | LOC_Os06g28124 | Os06g0475400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |