| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02644 | 5:16,248,352-16,248,764 | + | C2H5g17544 | - | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C1H5g06235 | 5:16,251,846-16,259,936 | - | C2H5g09572 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C1H5g07655 | 5:16,273,502-16,276,522 | + | C2H5g14010 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C1H5g16377 | 5:16,292,543-16,298,303 | - | C2H5g30500 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C1H5g29208 | 5:16,299,479-16,300,013 | - | - | - | - | - | - | Detail |
| C1H5g18086 | 5:16,310,502-16,318,701 | + | C2H5g11444 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C1H5g22231 | 5:16,320,596-16,323,884 | - | C2H5g22366 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C1H5g07753 | 5:16,338,372-16,339,250 | - | C2H5g14510 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C1H5g01736 | 5:16,341,816-16,342,366 | - | C2H5g20401 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C1H5g28806 | 5:16,342,750-16,348,841 | - | C2H5g21665 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C1H5g13458 | 5:16,356,139-16,360,666 | - | C2H5g22578 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C1H5g23907 | 5:16,367,482-16,368,533 | + | C2H5g22810 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C1H5g25708 | 5:16,372,134-16,373,574 | + | C2H5g14027 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| C1H5g10361 | 5:16,373,908-16,378,104 | + | C2H5g06598 | CX5g038053 | LOC_Os05g33880 | Os05g0409300 | - | Detail |
| C1H5g20921 | 5:16,379,238-16,384,284 | + | C2H5g24418 | CX5g040809 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| C1H5g09074 | 5:16,388,271-16,390,229 | - | C2H5g11844 | CX5g041144 | LOC_Os05g33900 | Os05g0409500 | - | Detail |
| C1H5g30333 | 5:16,414,244-16,415,575 | + | C2H5g23232 | CX5g037035 | LOC_Os05g33920 | Os05g0409800 | - | Detail |
| C1H5g08005 | 5:16,425,658-16,426,710 | + | C2H5g30472 | CX5g037287 | LOC_Os05g33940 | Os05g0410200 | - | Detail |
| C1H5g00588 | 5:16,435,503-16,440,524 | - | C2H5g17136 | CX5g040712 | LOC_Os05g33960 | Os05g0410500 | - | Detail |
| C1H5g18824 | 5:16,453,084-16,455,295 | + | C2H5g01676 | CX5g037111 | LOC_Os05g33960 | Os05g0410800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01275 | 3:4,215,112-4,223,351 | + | C1H3g18179 | CX3g027446 | LOC_Os03g09260 | Os03g0192800 | - | Detail |
| C2H3g19711 | 3:4,226,664-4,232,837 | + | C1H3g11049 | CX3g025926 | LOC_Os03g09280 | Os03g0193000 | - | Detail |
| C2H3g11800 | 3:4,233,966-4,236,254 | + | C1H3g04153 | CX3g025810 | LOC_Os03g09290 | Os03g0193075 | - | Detail |
| C2H3g07804 | 3:4,237,041-4,239,262 | + | C1H3g25160 | CX3g028060 | LOC_Os03g09300 | Os03g0191700 | - | Detail |
| C2H3g11506 | 3:4,240,806-4,245,379 | - | C1H3g05489 | CX3g027000 | LOC_Os03g09310 | Os03g0193225 | - | Detail |
| C2H3g05261 | 3:4,252,292-4,253,230 | + | C1H3g15014 | CX3g026217 | LOC_Os03g09820 | Os03g0193600 | - | Detail |
| C2H3g20661 | 3:4,254,155-4,255,363 | - | C1H3g23845 | CX3g030575 | LOC_Os03g09840 | Os03g0194100 | - | Detail |
| C2H3g25674 | 3:4,261,901-4,263,148 | - | C1H3g08748 | CX3g026299 | LOC_Os03g09850 | Os03g0194300 | - | Detail |
| C2H3g25314 | 3:4,266,561-4,268,809 | + | C1H3g08609 | CX3g025342 | LOC_Os03g09860 | Os03g0194400 | - | Detail |
| C2H3g01850 | 3:4,269,487-4,271,847 | + | C1H3g26915 | CX3g029454 | LOC_Os03g09870 | Os03g0194500 | - | Detail |
| C2H3g10528 | 3:4,273,551-4,274,138 | + | C1H3g23931 | CX3g027093 | LOC_Os03g09880 | Os03g0194600 | - | Detail |
| C2H3g10333 | 3:4,275,054-4,275,834 | - | C1H3g18007 | - | - | - | - | Detail |
| C2H3g02717 | 3:4,282,663-4,284,765 | + | C1H3g25501 | CX3g027004 | LOC_Os03g09900 | Os03g0194900 | - | Detail |
| C2H3g11804 | 3:4,295,172-4,298,459 | + | C1H3g25063 | CX3g028012 | LOC_Os03g09910 | Os03g0195100 | OsALD1 | Detail |
| C2H3g05380 | 3:4,298,977-4,302,524 | - | C1H3g19160 | CX3g030407 | LOC_Os03g09920 | Os03g0195200 | - | Detail |
| C2H3g24496 | 3:4,304,453-4,308,533 | - | C1H3g06347 | CX3g025617 | LOC_Os03g09930 | Os03g0195300 | - | Detail |
| C2H3g09781 | 3:4,327,383-4,332,902 | - | C1H3g05383 | CX3g025665 | LOC_Os03g09940 | Os03g0195450 | - | Detail |
| C2H3g05423 | 3:4,367,096-4,370,811 | + | C1H3g21097 | CX3g030854 | LOC_Os03g09970 | Os03g0195800 | - | Detail |
| C2H3g02477 | 3:4,371,320-4,371,737 | - | C1H3g03766 | - | - | - | - | Detail |
| C2H3g12869 | 3:4,375,850-4,379,747 | + | C1H3g10488 | CX3g026812 | LOC_Os03g09980 | Os03g0196000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |