| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02644 | 5:16,248,352-16,248,764 | + | C2H5g17544 | - | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C1H5g06235 | 5:16,251,846-16,259,936 | - | C2H5g09572 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C1H5g07655 | 5:16,273,502-16,276,522 | + | C2H5g14010 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C1H5g16377 | 5:16,292,543-16,298,303 | - | C2H5g30500 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C1H5g29208 | 5:16,299,479-16,300,013 | - | - | - | - | - | - | Detail |
| C1H5g18086 | 5:16,310,502-16,318,701 | + | C2H5g11444 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C1H5g22231 | 5:16,320,596-16,323,884 | - | C2H5g22366 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C1H5g07753 | 5:16,338,372-16,339,250 | - | C2H5g14510 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C1H5g01736 | 5:16,341,816-16,342,366 | - | C2H5g20401 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C1H5g28806 | 5:16,342,750-16,348,841 | - | C2H5g21665 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C1H5g13458 | 5:16,356,139-16,360,666 | - | C2H5g22578 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C1H5g23907 | 5:16,367,482-16,368,533 | + | C2H5g22810 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C1H5g25708 | 5:16,372,134-16,373,574 | + | C2H5g14027 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| C1H5g10361 | 5:16,373,908-16,378,104 | + | C2H5g06598 | CX5g038053 | LOC_Os05g33880 | Os05g0409300 | - | Detail |
| C1H5g20921 | 5:16,379,238-16,384,284 | + | C2H5g24418 | CX5g040809 | LOC_Os05g33890 | Os05g0409400 | MAP65-5 | Detail |
| C1H5g09074 | 5:16,388,271-16,390,229 | - | C2H5g11844 | CX5g041144 | LOC_Os05g33900 | Os05g0409500 | - | Detail |
| C1H5g30333 | 5:16,414,244-16,415,575 | + | C2H5g23232 | CX5g037035 | LOC_Os05g33920 | Os05g0409800 | - | Detail |
| C1H5g08005 | 5:16,425,658-16,426,710 | + | C2H5g30472 | CX5g037287 | LOC_Os05g33940 | Os05g0410200 | - | Detail |
| C1H5g00588 | 5:16,435,503-16,440,524 | - | C2H5g17136 | CX5g040712 | LOC_Os05g33960 | Os05g0410500 | - | Detail |
| C1H5g18824 | 5:16,453,084-16,455,295 | + | C2H5g01676 | CX5g037111 | LOC_Os05g33960 | Os05g0410800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g02296 | 11:19,512,813-19,518,250 | + | C1H11g15811 | CX11g014040 | LOC_Os11g37520 | Os11g0585900 | - | Detail |
| C2H11g07928 | 11:19,524,299-19,537,910 | + | C1H11g28872 | CX11g012778 | LOC_Os11g37540 | Os11g0586100 | Xa46(t) | Detail |
| C2H11g29167 | 11:19,538,204-19,539,203 | - | C1H11g05180 | CX11g014801 | LOC_Os11g37550 | Os11g0586200 | - | Detail |
| C2H11g27585 | 11:19,539,927-19,580,459 | - | C1H11g02737 | CX11g014870 | LOC_Os11g37560 | Os11g0586300 | OsLESV, FLO9 | Detail |
| C2H11g19353 | 11:19,620,010-19,620,842 | - | - | - | - | - | - | Detail |
| C2H11g13343 | 11:19,668,099-19,671,145 | + | C1H11g06719 | CX11g011943 | LOC_Os11g37640 | Os11g0586900 | - | Detail |
| C2H11g29893 | 11:19,673,528-19,679,216 | + | C1H11g31000 | CX11g012852 | - | Os11g0587000 | - | Detail |
| C2H11g22574 | 11:19,676,309-19,683,503 | - | C1H11g14633 | CX11g011793 | LOC_Os11g37660 | Os11g0587100 | - | Detail |
| C2H11g29444 | 11:19,693,831-19,696,561 | - | C1H11g09698 | CX11g011727 | LOC_Os11g37670 | Os11g0587300 | - | Detail |
| C2H11g04630 | 11:19,722,148-19,726,283 | - | C1H11g11427 | CX11g014981 | LOC_Os11g37690 | Os11g0587500 | - | Detail |
| C2H11g16990 | 11:19,731,145-19,740,365 | - | C1H11g02445 | CX11g012759 | LOC_Os11g37700 | Os11g0587600 | - | Detail |
| C2H11g25991 | 11:19,751,986-19,752,492 | + | - | - | - | - | - | Detail |
| C2H11g01531 | 11:19,753,800-19,755,569 | + | C1H11g25277 | CX11g012415 | LOC_Os11g37720 | Os11g0588100 | - | Detail |
| C2H11g16348 | 11:19,757,984-19,762,206 | + | C1H11g12391 | CX11g010872 | LOC_Os11g37730 | Os11g0588300 | - | Detail |
| C2H11g08669 | 11:19,767,345-19,770,609 | + | C1H11g13135 | CX11g013750 | LOC_Os11g37740 | Os11g0588400 | - | Detail |
| C2H11g03933 | 11:19,771,974-19,774,060 | - | C1H3g06307 | CX11g013486 | LOC_Os07g43120 | Os03g0822100 | - | Detail |
| C2H11g19261 | 11:19,772,931-19,773,507 | + | - | - | - | - | - | Detail |
| C2H11g16052 | 11:19,792,800-19,793,510 | + | - | - | - | - | - | Detail |
| C2H11g10450 | 11:19,803,795-19,808,137 | + | C1H11g13135 | CX11g014691 | LOC_Os11g37850 | Os11g0590400 | - | Detail |
| C2H11g10353 | 11:19,818,152-19,824,645 | + | C1H11g00964 | CX11g013750 | LOC_Os11g37860 | Os11g0590700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |