| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g26333 | 1:22,950,384-22,953,447 | + | C2H2g17365 | CX2g019183 | LOC_Os08g13580 | - | - | Detail |
| C1H1g25999 | 1:22,990,165-22,990,785 | + | C2H1g07012 | CX1g003479 | LOC_Os01g45160 | Os01g0638800 | - | Detail |
| C1H1g28061 | 1:23,000,623-23,003,827 | + | C2H1g28691 | CX1g000740 | LOC_Os01g45190 | Os01g0639100 | OsRH2 | Detail |
| C1H1g08315 | 1:23,004,558-23,010,493 | - | C2H1g30211 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C1H1g11479 | 1:23,047,060-23,055,519 | + | C2H1g17536 | CX1g002383 | LOC_Os01g45274 | Os01g0639900 | BETACA1, OsβCA1, OsbCA1 | Detail |
| C1H1g17843 | 1:23,058,421-23,061,255 | + | C2H1g27294 | CX1g007210 | LOC_Os01g45274 | Os01g0640000 | - | Detail |
| C1H1g22957 | 1:23,063,595-23,069,263 | - | C2H1g21978 | CX1g000695 | LOC_Os01g45320 | Os01g0640200 | - | Detail |
| C1H1g31055 | 1:23,074,367-23,077,091 | + | C2H1g08088 | CX1g002458 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| C1H1g10058 | 1:23,077,748-23,079,838 | - | C2H1g22980 | CX1g004617 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| C1H1g19962 | 1:23,081,938-23,085,139 | - | C2H1g13504 | CX1g003997 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| C1H1g17185 | 1:23,085,988-23,090,077 | + | C2H1g09207 | CX1g000116 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| C1H1g25061 | 1:23,090,542-23,093,587 | + | C2H1g17482 | CX1g004780 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| C1H1g31552 | 1:23,107,367-23,110,307 | - | C2H1g02385 | CX1g004195 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| C1H1g00902 | 1:23,115,419-23,117,719 | + | C2H1g03402 | CX1g003051 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| C1H1g12918 | 1:23,119,571-23,125,628 | + | C2H1g07647 | CX1g005344 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| C1H1g06064 | 1:23,127,553-23,128,262 | - | C2H1g23910 | - | LOC_Os01g45470 | Os01g0642200 | - | Detail |
| C1H1g20782 | 1:23,139,193-23,139,799 | + | - | - | - | - | - | Detail |
| C1H1g02209 | 1:23,150,762-23,154,950 | + | C2H1g05902 | CX1g000192 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| C1H1g26078 | 1:23,156,817-23,158,395 | - | C2H1g09079 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C1H1g13791 | 1:23,161,581-23,162,449 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25012 | 3:11,363,444-11,365,260 | - | C1H3g19465 | CX3g031034 | LOC_Os03g22270 | Os03g0342900 | - | Detail |
| C2H3g07847 | 3:11,371,881-11,376,882 | + | C1H3g19573 | CX3g027432 | LOC_Os03g22320 | Os03g0343300 | - | Detail |
| C2H3g27542 | 3:11,378,434-11,382,128 | + | C1H3g04598 | CX3g030144 | LOC_Os03g22330 | Os03g0343400 | - | Detail |
| C2H3g22833 | 3:11,383,871-11,385,472 | - | C1H3g18164 | CX3g027840 | LOC_Os03g22340 | Os03g0343500 | - | Detail |
| C2H3g27042 | 3:11,389,626-11,392,034 | + | C1H3g07503 | CX3g028939 | LOC_Os03g22350 | Os03g0343700 | - | Detail |
| C2H3g07184 | 3:11,401,989-11,406,699 | + | C1H3g24513 | CX3g027723 | LOC_Os03g22380 | Os03g0344100 | OsSR32 | Detail |
| C2H3g20782 | 3:11,410,545-11,412,615 | - | C1H3g14886 | CX3g030547 | LOC_Os03g22390 | Os03g0305400 | OsUSP3 | Detail |
| C2H3g20681 | 3:11,414,281-11,419,375 | - | C1H3g05435 | CX3g030391 | LOC_Os03g22400 | Os03g0344300 | OsFUG1, OsFUG1.3 | Detail |
| C2H3g04996 | 3:11,428,070-11,438,987 | - | C1H3g07428 | CX3g028417 | LOC_Os03g22420 | Os03g0344700 | - | Detail |
| C2H3g03468 | 3:11,444,495-11,448,954 | - | C1H3g00349 | CX3g028111 | LOC_Os03g22430 | Os03g0344900 | - | Detail |
| C2H3g18234 | 3:11,454,918-11,459,144 | - | C1H3g20152 | CX3g028584 | LOC_Os03g22450 | Os03g0345100 | OsRad9, OsRad9.2 | Detail |
| C2H3g01674 | 3:11,459,289-11,460,721 | + | C1H3g20510 | CX3g029736 | LOC_Os03g22460 | Os03g0345200 | - | Detail |
| C2H3g02585 | 3:11,462,484-11,464,298 | - | C1H3g29872 | CX3g029517 | LOC_Os03g22470 | Os03g0345300 | - | Detail |
| C2H3g21914 | 3:11,481,807-11,483,706 | - | C1H3g23882 | CX3g027384 | LOC_Os03g22490 | Os03g0345700 | - | Detail |
| C2H3g16014 | 3:11,520,023-11,520,352 | - | C1H3g04062 | CX3g030360 | LOC_Os03g22510 | Os03g0346200 | ACE1, OsSIN | Detail |
| C2H3g21311 | 3:11,537,918-11,544,352 | + | C1H3g13519 | CX3g029712 | LOC_Os03g22540 | Os03g0346700 | - | Detail |
| C2H3g14665 | 3:11,546,502-11,551,840 | + | C1H3g09102 | CX3g029457 | LOC_Os03g22550 | Os03g0346800 | - | Detail |
| C2H3g24882 | 3:11,555,281-11,560,901 | - | C1H3g03973 | CX3g027020 | LOC_Os03g22560 | Os03g0346900 | - | Detail |
| C2H3g28349 | 3:11,571,302-11,582,977 | + | C1H3g06261 | CX3g030324 | LOC_Os03g22570 | Os03g0347200 | - | Detail |
| C2H3g09980 | 3:11,585,339-11,596,872 | - | C1H3g24032 | CX3g026560 | LOC_Os03g22580 | Os03g0347300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |