| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g04152 | 5:15,668,422-15,668,724 | + | - | CX5g039801 | LOC_Os05g32860 | Os05g0395400 | - | Detail |
| C1H5g20136 | 5:15,684,827-15,689,283 | - | C2H5g25398 | CX5g041092 | LOC_Os05g32880 | Os05g0395600 | - | Detail |
| C1H5g29241 | 5:15,731,282-15,733,099 | - | - | CX5g038356 | LOC_Os05g32960 | Os05g0396900 | - | Detail |
| C1H5g05270 | 5:15,743,955-15,746,412 | - | C2H5g22161 | CX5g036840 | LOC_Os05g32970 | Os05g0397300 | - | Detail |
| C1H5g28580 | 5:15,750,732-15,755,367 | - | C2H5g21572 | CX5g038178 | LOC_Os05g33000 | Os05g0397650 | - | Detail |
| C1H5g17477 | 5:15,756,093-15,763,312 | - | C2H5g14805 | CX5g039927 | LOC_Os05g33020 | Os05g0397700 | - | Detail |
| C1H5g00765 | 5:15,763,530-15,767,601 | + | C2H5g25635 | CX5g039288 | LOC_Os05g33010 | Os05g0397800 | - | Detail |
| C1H5g15753 | 5:15,769,305-15,773,200 | + | C2H5g00092 | CX5g036879 | LOC_Os05g33030 | Os05g0397900 | - | Detail |
| C1H5g11914 | 5:15,773,887-15,774,740 | - | C2H5g20286 | CX5g037239 | LOC_Os05g33040 | Os05g0398000 | OsCYCP1;1 | Detail |
| C1H5g28942 | 5:15,778,249-15,787,068 | - | C2H5g27231 | CX5g037249 | LOC_Os05g33050 | Os05g0398100 | - | Detail |
| C1H5g16303 | 5:15,796,003-15,796,566 | + | C2H5g19259 | - | - | - | - | Detail |
| C1H5g00260 | 5:15,798,658-15,799,198 | - | C2H5g04735 | - | - | - | - | Detail |
| C1H5g19211 | 5:15,807,293-15,811,662 | + | C2H5g14955 | CX5g037475 | LOC_Os05g33080 | Os05g0398800 | - | Detail |
| C1H5g10129 | 5:15,819,352-15,822,632 | + | C2H5g23530 | CX5g036980 | LOC_Os05g33100 | Os05g0399100 | - | Detail |
| C1H5g31879 | 5:15,833,928-15,838,878 | + | C2H5g23530 | CX5g036980 | LOC_Os05g33100 | Os05g0399100 | - | Detail |
| C1H5g23483 | 5:15,840,952-15,843,877 | + | C2H5g00064 | CX5g036980 | LOC_Os05g33110 | Os05g0399200 | - | Detail |
| C1H5g23914 | 5:15,847,401-15,848,534 | + | C2H5g02825 | CX5g041133 | LOC_Os05g33130 | Os05g0399300 | OsChia1b, Cht-2 | Detail |
| C1H5g21497 | 5:15,861,271-15,862,673 | + | C2H5g28257 | CX5g041133 | LOC_Os05g33140 | Os05g0399400 | - | Detail |
| C1H5g31105 | 5:15,899,148-15,900,449 | + | C2H5g05340 | CX5g037858 | LOC_Os05g33150 | Os05g0399700 | OsChia1d, Cht7 | Detail |
| C1H5g18948 | 5:15,900,745-15,901,536 | - | C2H5g17918 | CX5g038227 | LOC_Os05g33160 | Os05g0170300 | OsSGN3b | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21608 | 3:27,656,719-27,660,241 | - | C1H3g23470 | CX3g028973 | LOC_Os03g52630 | Os03g0736300 | - | Detail |
| C2H3g15503 | 3:27,664,564-27,668,007 | - | C1H3g16767 | CX3g029628 | LOC_Os03g52640 | Os03g0736400 | - | Detail |
| C2H3g14297 | 3:27,669,405-27,673,074 | + | C1H3g06383 | CX3g026452 | LOC_Os03g52650 | Os03g0736500 | - | Detail |
| C2H3g25472 | 3:27,673,881-27,674,926 | - | C1H3g27583 | CX3g030782 | LOC_Os03g52670 | Os03g0736700 | - | Detail |
| C2H3g06997 | 3:27,690,841-27,694,864 | - | C1H3g22100 | CX3g030023 | LOC_Os03g52690 | Os03g0737000 | - | Detail |
| C2H3g03773 | 3:27,700,068-27,708,325 | - | C1H3g13284 | CX3g030091 | LOC_Os03g52700 | Os03g0737200 | OsHOS1 | Detail |
| C2H3g13435 | 3:27,709,054-27,711,006 | - | C1H3g01016 | CX3g030361 | LOC_Os03g52720 | Os03g0737300 | - | Detail |
| C2H3g06862 | 3:27,713,948-27,715,594 | - | C1H3g28619 | CX3g030361 | LOC_Os03g52730 | Os03g0737400 | - | Detail |
| C2H3g04382 | 3:27,716,139-27,720,319 | + | C1H3g18700 | CX3g025820 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| C2H3g27223 | 3:27,724,488-27,727,069 | - | C1H3g06923 | CX3g026634 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| C2H3g08831 | 3:27,729,452-27,739,232 | + | C1H3g13520 | CX3g025574 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| C2H3g00418 | 3:27,739,440-27,742,656 | - | C1H3g22442 | CX3g026366 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| C2H3g24375 | 3:27,742,829-27,746,487 | + | C1H3g19238 | CX3g026865 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| C2H3g01060 | 3:27,747,275-27,765,946 | + | C1H3g14512 | CX3g030189 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| C2H3g05635 | 3:27,767,482-27,772,151 | + | C1H3g21044 | CX3g026362 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| C2H3g05845 | 3:27,783,515-27,787,131 | + | C1H3g07947 | CX3g025013 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| C2H3g02923 | 3:27,794,046-27,796,994 | + | C1H3g24267 | CX3g030893 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| C2H3g01404 | 3:27,805,911-27,807,678 | + | C1H3g14490 | CX3g028113 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| C2H3g15580 | 3:27,837,312-27,841,357 | + | C1H3g22532 | CX3g026120 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| C2H3g17064 | 3:27,842,274-27,846,884 | + | C1H3g30167 | CX3g027471 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |