| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g04152 | 5:15,668,422-15,668,724 | + | - | CX5g039801 | LOC_Os05g32860 | Os05g0395400 | - | Detail |
| C1H5g20136 | 5:15,684,827-15,689,283 | - | C2H5g25398 | CX5g041092 | LOC_Os05g32880 | Os05g0395600 | - | Detail |
| C1H5g29241 | 5:15,731,282-15,733,099 | - | - | CX5g038356 | LOC_Os05g32960 | Os05g0396900 | - | Detail |
| C1H5g05270 | 5:15,743,955-15,746,412 | - | C2H5g22161 | CX5g036840 | LOC_Os05g32970 | Os05g0397300 | - | Detail |
| C1H5g28580 | 5:15,750,732-15,755,367 | - | C2H5g21572 | CX5g038178 | LOC_Os05g33000 | Os05g0397650 | - | Detail |
| C1H5g17477 | 5:15,756,093-15,763,312 | - | C2H5g14805 | CX5g039927 | LOC_Os05g33020 | Os05g0397700 | - | Detail |
| C1H5g00765 | 5:15,763,530-15,767,601 | + | C2H5g25635 | CX5g039288 | LOC_Os05g33010 | Os05g0397800 | - | Detail |
| C1H5g15753 | 5:15,769,305-15,773,200 | + | C2H5g00092 | CX5g036879 | LOC_Os05g33030 | Os05g0397900 | - | Detail |
| C1H5g11914 | 5:15,773,887-15,774,740 | - | C2H5g20286 | CX5g037239 | LOC_Os05g33040 | Os05g0398000 | OsCYCP1;1 | Detail |
| C1H5g28942 | 5:15,778,249-15,787,068 | - | C2H5g27231 | CX5g037249 | LOC_Os05g33050 | Os05g0398100 | - | Detail |
| C1H5g16303 | 5:15,796,003-15,796,566 | + | C2H5g19259 | - | - | - | - | Detail |
| C1H5g00260 | 5:15,798,658-15,799,198 | - | C2H5g04735 | - | - | - | - | Detail |
| C1H5g19211 | 5:15,807,293-15,811,662 | + | C2H5g14955 | CX5g037475 | LOC_Os05g33080 | Os05g0398800 | - | Detail |
| C1H5g10129 | 5:15,819,352-15,822,632 | + | C2H5g23530 | CX5g036980 | LOC_Os05g33100 | Os05g0399100 | - | Detail |
| C1H5g31879 | 5:15,833,928-15,838,878 | + | C2H5g23530 | CX5g036980 | LOC_Os05g33100 | Os05g0399100 | - | Detail |
| C1H5g23483 | 5:15,840,952-15,843,877 | + | C2H5g00064 | CX5g036980 | LOC_Os05g33110 | Os05g0399200 | - | Detail |
| C1H5g23914 | 5:15,847,401-15,848,534 | + | C2H5g02825 | CX5g041133 | LOC_Os05g33130 | Os05g0399300 | OsChia1b, Cht-2 | Detail |
| C1H5g21497 | 5:15,861,271-15,862,673 | + | C2H5g28257 | CX5g041133 | LOC_Os05g33140 | Os05g0399400 | - | Detail |
| C1H5g31105 | 5:15,899,148-15,900,449 | + | C2H5g05340 | CX5g037858 | LOC_Os05g33150 | Os05g0399700 | OsChia1d, Cht7 | Detail |
| C1H5g18948 | 5:15,900,745-15,901,536 | - | C2H5g17918 | CX5g038227 | LOC_Os05g33160 | Os05g0170300 | OsSGN3b | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g11407 | 1:9,023,639-9,023,920 | - | - | - | LOC_Os01g17980 | - | - | Detail |
| C2H1g22929 | 1:9,028,394-9,032,997 | + | C1H1g00974 | CX1g006919 | LOC_Os01g17990 | - | - | Detail |
| C2H1g07113 | 1:9,058,742-9,062,526 | - | C1H1g19330 | CX1g000239 | LOC_Os01g18050 | Os01g0282800 | OsTUB1 | Detail |
| C2H1g14204 | 1:9,073,023-9,078,255 | - | C1H1g12917 | CX1g003294 | LOC_Os01g18060 | Os01g0283000 | - | Detail |
| C2H1g26601 | 1:9,078,275-9,082,841 | + | C1H1g28761 | CX1g007053 | LOC_Os01g18070 | Os01g0283100 | - | Detail |
| C2H1g01489 | 1:9,095,726-9,096,517 | + | - | - | LOC_Os01g18080 | Os01g0283300 | - | Detail |
| C2H1g29322 | 1:9,097,981-9,098,328 | + | - | CX1g005891 | LOC_Os01g18090 | Os01g0283400 | - | Detail |
| C2H1g04439 | 1:9,099,489-9,101,501 | - | C1H1g04332 | CX1g005282 | LOC_Os01g18100 | Os01g0283500 | - | Detail |
| C2H1g27306 | 1:9,111,838-9,113,757 | + | C1H1g15010 | CX1g001578 | LOC_Os01g18110 | Os01g0283600 | - | Detail |
| C2H1g06247 | 1:9,118,383-9,121,287 | - | C1H1g08875 | CX1g006385 | - | Os05g0435500 | - | Detail |
| C2H1g08442 | 1:9,121,349-9,121,684 | + | C1H1g09834 | - | - | - | - | Detail |
| C2H1g27708 | 1:9,123,503-9,126,848 | + | C1H1g15010 | CX1g005965 | LOC_Os01g18120 | Os01g0283700 | - | Detail |
| C2H1g22354 | 1:9,131,494-9,132,603 | + | C1H1g31050 | CX1g005156 | LOC_Os01g18150 | Os01g0284300 | - | Detail |
| C2H1g13905 | 1:9,134,569-9,135,338 | - | C1H1g09627 | CX1g002731 | LOC_Os01g18170 | Os01g0284500 | OsGER4 | Detail |
| C2H1g17254 | 1:9,142,721-9,145,663 | + | C1H1g10680 | CX1g000924 | LOC_Os01g18210 | Os01g0284700 | - | Detail |
| C2H1g07308 | 1:9,150,165-9,152,540 | - | C1H1g13588 | CX1g001111 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| C2H1g20440 | 1:9,158,775-9,159,592 | - | C1H1g17641 | CX1g003253 | LOC_Os01g18230 | Os01g0759700 | - | Detail |
| C2H1g10789 | 1:9,167,708-9,169,939 | - | C1H1g06479 | CX1g006251 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| C2H1g03219 | 1:9,209,366-9,212,756 | + | C1H1g05697 | CX1g000217 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| C2H1g23388 | 1:9,217,932-9,221,431 | - | C1H1g18723 | CX1g006989 | LOC_Os01g02110 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |