| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g29103 | 12:17,038,545-17,042,648 | - | C1H12g21511 | CX12g017474 | LOC_Os12g32992 | Os12g0514600 | - | Detail |
| C2H12g05027 | 12:17,047,399-17,050,946 | + | C1H12g00544 | CX12g016990 | LOC_Os12g33020 | Os12g0514900 | - | Detail |
| C2H12g13196 | 12:17,053,696-17,064,304 | + | C1H12g30514 | CX12g016294 | - | Os12g0133800 | OsPIN1d | Detail |
| C2H12g05586 | 12:17,066,760-17,067,407 | + | - | - | - | - | - | Detail |
| C2H12g00435 | 12:17,075,051-17,078,121 | - | C1H12g17110 | CX12g016248 | LOC_Os12g33070 | Os12g0515300 | OsMYB46 | Detail |
| C2H12g00847 | 12:17,089,456-17,092,808 | + | C1H12g09493 | CX12g016936 | LOC_Os12g33080 | Os12g0515400 | - | Detail |
| C2H12g01460 | 12:17,107,335-17,109,191 | + | C1H12g04283 | CX12g017334 | LOC_Os12g33090 | Os12g0515500 | - | Detail |
| C2H12g23011 | 12:17,115,672-17,119,811 | - | C1H12g27762 | CX12g018033 | LOC_Os12g33100 | Os12g0515600 | - | Detail |
| C2H12g22740 | 12:17,127,872-17,128,363 | + | C1H12g07881 | CX12g016228 | LOC_Os12g33120 | Os12g0515800 | DX1 | Detail |
| C2H12g16497 | 12:17,131,161-17,131,636 | + | C1H12g16214 | CX12g018212 | LOC_Os12g33130 | Os12g0516000 | - | Detail |
| C2H12g30447 | 12:17,139,909-17,141,133 | - | C1H12g09158 | CX12g018198 | LOC_Os12g33150 | Os12g0516200 | - | Detail |
| C2H12g05968 | 12:17,143,535-17,144,538 | - | - | CX12g016948 | - | - | - | Detail |
| C2H12g24248 | 12:17,146,219-17,150,811 | + | C1H7g02451 | - | LOC_Os03g02120 | - | - | Detail |
| C2H12g28030 | 12:17,149,884-17,154,814 | - | C1H12g15410 | CX12g015082 | LOC_Os12g33160 | Os12g0516300 | - | Detail |
| C2H12g08937 | 12:17,155,044-17,155,334 | - | C1H12g08774 | CX12g018650 | LOC_Os12g33165 | Os12g0516350 | - | Detail |
| C2H12g05061 | 12:17,158,468-17,162,547 | + | C1H12g01683 | - | - | Os12g0516700 | - | Detail |
| C2H12g05761 | 12:17,163,973-17,165,787 | - | C1H12g29363 | CX12g016031 | LOC_Os12g33194 | Os12g0516800 | - | Detail |
| C2H12g01391 | 12:17,168,714-17,169,976 | + | C1H12g06518 | CX12g016860 | LOC_Os12g33210 | Os12g0516900 | - | Detail |
| C2H12g03232 | 12:17,170,705-17,173,613 | + | C1H12g06518 | CX12g016769 | LOC_Os12g33210 | Os12g0516900 | - | Detail |
| C2H12g19791 | 12:17,175,426-17,178,690 | + | C1H12g06518 | CX12g016769 | LOC_Os12g33220 | Os12g0517000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |