| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07733 | 1:34,669,121-34,674,642 | + | C1H1g14363 | CX1g005857 | LOC_Os01g67480 | Os01g0900800 | - | Detail |
| C2H1g29765 | 1:34,675,127-34,676,723 | - | C1H1g14549 | CX1g000615 | LOC_Os01g67490 | Os01g0900900 | - | Detail |
| C2H1g26804 | 1:34,679,732-34,683,999 | - | C1H1g27174 | CX1g005989 | LOC_Os01g67500 | Os01g0901000 | - | Detail |
| C2H1g11554 | 1:34,696,086-34,701,365 | - | C1H1g12588 | CX1g004183 | LOC_Os01g67510 | Os01g0901200 | - | Detail |
| C2H1g14361 | 1:34,702,056-34,704,661 | + | C1H1g21800 | - | LOC_Os01g67520 | Os01g0901300 | - | Detail |
| C2H1g28157 | 1:34,710,466-34,714,233 | + | C1H1g13500 | CX1g001539 | LOC_Os01g67530 | Os01g0901500 | - | Detail |
| C2H1g20549 | 1:34,715,595-34,717,506 | + | C1H1g09998 | CX1g001539 | LOC_Os01g67540 | Os01g0901600 | - | Detail |
| C2H1g10318 | 1:34,718,063-34,718,960 | + | C1H1g09998 | CX1g001539 | LOC_Os01g67540 | Os01g0901600 | - | Detail |
| C2H1g14160 | 1:34,719,838-34,723,679 | + | C1H1g11167 | CX1g003814 | LOC_Os01g67550 | Os01g0901700 | - | Detail |
| C2H1g10209 | 1:34,724,102-34,726,316 | - | C1H1g11537 | CX1g002950 | LOC_Os01g67560 | Os01g0901800 | - | Detail |
| C2H1g18397 | 1:34,727,618-34,732,120 | - | C1H1g11165 | CX1g002071 | LOC_Os01g67570 | Os01g0901900 | OsPAP3 | Detail |
| C2H1g27175 | 1:34,733,276-34,739,078 | - | C1H1g07120 | CX1g003005 | LOC_Os01g67580 | Os01g0902100 | - | Detail |
| C2H1g01159 | 1:34,744,906-34,751,953 | + | C1H1g07945 | CX1g002834 | LOC_Os01g67590 | Os01g0902200 | - | Detail |
| C2H1g09953 | 1:34,752,435-34,755,442 | - | C1H1g09859 | CX1g004278 | LOC_Os01g67600 | Os01g0902300 | - | Detail |
| C2H1g21673 | 1:34,760,057-34,762,947 | + | C1H1g10919 | CX1g003173 | LOC_Os01g67630 | Os01g0902700 | - | Detail |
| C2H1g11697 | 1:34,764,741-34,768,170 | + | C1H1g02991 | CX1g000416 | LOC_Os01g67640 | Os01g0902800 | - | Detail |
| C2H1g29533 | 1:34,789,081-34,794,371 | - | C1H1g12112 | CX1g006854 | LOC_Os01g67720 | Os01g0904200 | - | Detail |
| C2H1g19214 | 1:34,794,730-34,796,834 | + | C1H1g23804 | CX1g003334 | LOC_Os01g67730 | Os01g0904300 | - | Detail |
| C2H1g10276 | 1:34,797,205-34,805,653 | - | C1H1g23062 | CX1g000154 | LOC_Os01g67740 | Os01g0904400 | - | Detail |
| C2H1g16992 | 1:34,806,315-34,811,049 | - | C1H1g02720 | CX1g001313 | LOC_Os01g67750 | Os01g0904500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |