| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g24817 | 8:21,749,344-21,752,196 | + | C1H8g05999 | CX8g054322 | LOC_Os08g40590 | Os08g0517700 | - | Detail |
| C2H8g04490 | 8:21,753,008-21,754,323 | - | C1H8g06788 | CX8g054570 | LOC_Os08g40600 | Os08g0517800 | - | Detail |
| C2H8g01143 | 8:21,755,569-21,757,023 | - | C1H8g13685 | CX8g051157 | LOC_Os08g40610 | Os08g0517900 | - | Detail |
| C2H8g15185 | 8:21,757,868-21,758,047 | - | C1H8g13685 | CX8g051157 | LOC_Os08g40610 | Os08g0517900 | - | Detail |
| C2H8g19438 | 8:21,766,335-21,770,976 | + | C1H8g08924 | CX8g050864 | LOC_Os08g40620 | Os08g0518100 | - | Detail |
| C2H8g02063 | 8:21,772,928-21,776,081 | - | C1H8g12041 | CX8g051822 | LOC_Os08g40630 | Os08g0518200 | - | Detail |
| C2H8g26493 | 8:21,781,569-21,782,462 | - | C1H8g22373 | CX8g054337 | LOC_Os08g40680 | Os08g0518800 | - | Detail |
| C2H8g07193 | 8:21,785,382-21,786,329 | + | C1H8g22373 | CX8g053488 | LOC_Os08g40690 | Os08g0518900 | - | Detail |
| C2H8g13729 | 8:21,787,857-21,789,444 | + | C1H8g31506 | CX8g051926 | LOC_Os08g40700 | Os08g0519000 | - | Detail |
| C2H8g27720 | 8:21,793,118-21,794,644 | - | C1H8g05297 | CX8g052752 | LOC_Os08g40720 | Os08g0519100 | - | Detail |
| C2H8g09995 | 8:21,800,790-21,802,404 | - | C1H8g11082 | CX8g054404 | - | Os08g0141000 | - | Detail |
| C2H8g05587 | 8:21,804,261-21,806,573 | - | C1H8g11082 | CX8g052517 | LOC_Os08g40640 | Os08g0518350 | - | Detail |
| C2H8g29826 | 8:21,816,168-21,821,118 | - | C1H8g31531 | CX8g051717 | LOC_Os08g40790 | Os08g0519400 | - | Detail |
| C2H8g08255 | 8:21,826,353-21,831,020 | + | C1H8g13205 | CX8g053497 | LOC_Os08g40820 | Os08g0519600 | - | Detail |
| C2H8g10028 | 8:21,839,219-21,842,460 | + | C1H8g15427 | CX8g054778 | LOC_Os08g40830 | Os08g0519700 | - | Detail |
| C2H8g12021 | 8:21,845,513-21,852,701 | + | C1H8g09208 | CX8g053862 | LOC_Os08g40830 | Os08g0519800 | - | Detail |
| C2H8g01663 | 8:21,853,419-21,855,983 | - | C1H8g02642 | CX8g053262 | LOC_Os08g40840 | Os08g0519900 | - | Detail |
| C2H8g08350 | 8:21,856,672-21,861,046 | - | C1H8g26214 | CX8g053282 | LOC_Os08g40850 | Os08g0520000 | - | Detail |
| C2H8g20150 | 8:21,861,618-21,864,661 | + | C1H8g00875 | CX8g050719 | LOC_Os08g40860 | Os08g0520100 | - | Detail |
| C2H8g12057 | 8:21,864,949-21,866,142 | - | C1H8g11327 | CX8g054665 | LOC_Os08g40870 | Os08g0520200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |