| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g28371 | 7:11,589,116-11,599,191 | + | C1H7g19127 | CX7g046916 | LOC_Os07g23944 | Os07g0421300 | - | Detail |
| C2H7g30615 | 7:11,606,819-11,609,054 | + | C1H7g23326 | CX7g046172 | LOC_Os07g23960 | Os07g0421600 | - | Detail |
| C2H7g15156 | 7:11,617,941-11,618,537 | + | - | CX7g050107 | LOC_Os07g23970 | Os07g0421800 | OsPAGN1 | Detail |
| C2H7g16555 | 7:11,635,363-11,652,409 | + | C1H7g21089 | CX7g048382 | LOC_Os07g23990 | Os07g0422000 | - | Detail |
| C2H7g20806 | 7:11,655,641-11,656,277 | + | C1H7g08151 | CX7g049305 | LOC_Os07g24000 | Os07g0422100 | - | Detail |
| C2H7g23963 | 7:11,710,308-11,711,051 | + | - | CX7g049533 | LOC_Os07g23640 | Os07g0418600 | OsRePRP2.2 | Detail |
| C2H7g06661 | 7:11,729,591-11,732,934 | + | C1H7g27736 | CX7g048142 | LOC_Os07g24050 | Os07g0422700 | - | Detail |
| C2H7g11380 | 7:11,739,266-11,740,492 | - | C1H7g20518 | CX7g049786 | LOC_Os07g24090 | Os07g0423000 | OsML1 | Detail |
| C2H7g20052 | 7:11,743,139-11,744,560 | + | C1H7g06060 | CX7g048527 | LOC_Os11g15010 | - | - | Detail |
| C2H7g20417 | 7:11,745,240-11,745,717 | - | C1H7g12910 | CX7g048166 | - | Os07g0103000 | - | Detail |
| C2H7g11256 | 7:11,793,234-11,798,931 | - | C1H7g00763 | CX7g048962 | LOC_Os07g24190 | Os07g0424400 | - | Detail |
| C2H7g20055 | 7:11,824,640-11,827,711 | - | C1H7g10096 | CX7g047181 | LOC_Os07g24230 | Os07g0425000 | - | Detail |
| C2H7g12121 | 7:11,894,314-11,894,910 | - | C1H7g11912 | CX7g047563 | LOC_Os07g25370 | Os07g0434300 | Os2R_MYB69 | Detail |
| C2H7g23918 | 7:11,905,710-11,906,318 | - | C1H7g28057 | CX7g047469 | LOC_Os07g25370 | Os07g0434300 | Os2R_MYB69 | Detail |
| C2H7g11299 | 7:11,909,758-11,916,458 | - | C1H7g21134 | CX7g048119 | LOC_Os07g25390 | Os07g0434500 | OsCHR736, CHR736 | Detail |
| C2H7g09063 | 7:11,924,778-11,927,160 | - | C1H7g14261 | CX7g048832 | LOC_Os07g25410 | Os07g0434700 | - | Detail |
| C2H7g08287 | 7:11,930,531-11,933,151 | - | C1H7g12803 | CX7g050052 | LOC_Os07g25420 | Os07g0435100 | OsRpn12 | Detail |
| C2H7g25536 | 7:11,936,437-11,937,109 | + | C1H7g24929 | CX7g048648 | LOC_Os07g25430 | Os07g0435300 | - | Detail |
| C2H7g18452 | 7:11,937,733-11,945,067 | - | C1H7g15359 | CX7g049540 | LOC_Os07g25440 | Os07g0435400 | - | Detail |
| C2H7g00516 | 7:11,970,397-11,976,862 | + | C1H7g27113 | CX7g048667 | LOC_Os07g25450 | Os07g0435900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |